Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.46■□□□□ 0.23
COL20A1Q9P218 NDUFS6P1-201ENST00000485187 316 ntBASIC16.46■□□□□ 0.23
COL20A1Q9P218 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL20A1Q9P218 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
COL20A1Q9P218 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.46■□□□□ 0.23
COL20A1Q9P218 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.46■□□□□ 0.23
COL20A1Q9P218 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
COL20A1Q9P218 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.46■□□□□ 0.23
COL20A1Q9P218 AC093752.3-201ENST00000567343 901 ntBASIC16.46■□□□□ 0.23
COL20A1Q9P218 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.46■□□□□ 0.23
COL20A1Q9P218 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.46■□□□□ 0.23
COL20A1Q9P218 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.46■□□□□ 0.23
COL20A1Q9P218 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.46■□□□□ 0.23
COL20A1Q9P218 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.46■□□□□ 0.23
COL20A1Q9P218 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL20A1Q9P218 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
COL20A1Q9P218 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.46■□□□□ 0.23
COL20A1Q9P218 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL20A1Q9P218 AC011498.7-201ENST00000624986 2027 ntBASIC16.46■□□□□ 0.23
COL20A1Q9P218 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
COL20A1Q9P218 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL20A1Q9P218 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL20A1Q9P218 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
COL20A1Q9P218 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
COL20A1Q9P218 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 AC005586.2-201ENST00000563946 837 ntBASIC16.45■□□□□ 0.22
COL20A1Q9P218 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 AC138894.2-201ENST00000602838 371 ntBASIC16.45■□□□□ 0.22
COL20A1Q9P218 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 AC103691.2-201ENST00000618824 433 ntBASIC16.45■□□□□ 0.22
COL20A1Q9P218 AC090386.2-201ENST00000623010 1039 ntBASIC16.45■□□□□ 0.22
COL20A1Q9P218 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
COL20A1Q9P218 AC113367.3-201ENST00000508316 1912 ntBASIC16.45■□□□□ 0.22
COL20A1Q9P218 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 KRT8P31-201ENST00000504812 1408 ntBASIC16.45■□□□□ 0.22
COL20A1Q9P218 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL20A1Q9P218 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.44■□□□□ 0.22
COL20A1Q9P218 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL20A1Q9P218 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
COL20A1Q9P218 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
COL20A1Q9P218 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.44■□□□□ 0.22
COL20A1Q9P218 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL20A1Q9P218 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.44■□□□□ 0.22
COL20A1Q9P218 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL20A1Q9P218 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
COL20A1Q9P218 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL20A1Q9P218 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.44■□□□□ 0.22
COL20A1Q9P218 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.44■□□□□ 0.22
COL20A1Q9P218 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL20A1Q9P218 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
COL20A1Q9P218 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL20A1Q9P218 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL20A1Q9P218 AL583805.1-201ENST00000391389 531 ntBASIC16.44■□□□□ 0.22
COL20A1Q9P218 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.44■□□□□ 0.22
COL20A1Q9P218 AC026316.1-201ENST00000398900 414 ntBASIC16.44■□□□□ 0.22
COL20A1Q9P218 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.44■□□□□ 0.22
COL20A1Q9P218 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms