Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
BRF2Q9HAW0 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.08□□□□□ -0.15
BRF2Q9HAW0 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
BRF2Q9HAW0 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
BRF2Q9HAW0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.08□□□□□ -0.15
BRF2Q9HAW0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 AC041040.2-201ENST00000622926 2899 ntBASIC14.08□□□□□ -0.16
BRF2Q9HAW0 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 AC006001.1-201ENST00000325130 474 ntBASIC14.08□□□□□ -0.16
BRF2Q9HAW0 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 TMEM14DP-201ENST00000422205 345 ntBASIC14.08□□□□□ -0.16
BRF2Q9HAW0 KRT43P-201ENST00000434019 910 ntBASIC14.08□□□□□ -0.16
BRF2Q9HAW0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 AC007551.1-201ENST00000457394 519 ntBASIC14.08□□□□□ -0.16
BRF2Q9HAW0 COX5BP1-201ENST00000507622 393 ntBASIC14.08□□□□□ -0.16
BRF2Q9HAW0 AP005018.1-201ENST00000525475 301 ntBASIC14.08□□□□□ -0.16
BRF2Q9HAW0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 AC078819.1-201ENST00000547454 765 ntBASIC14.08□□□□□ -0.16
BRF2Q9HAW0 AC012085.1-201ENST00000548270 765 ntBASIC14.08□□□□□ -0.16
BRF2Q9HAW0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 ZACNP1-201ENST00000612259 710 ntBASIC14.08□□□□□ -0.16
BRF2Q9HAW0 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 MST1P2-201ENST00000457982 2291 ntBASIC14.08□□□□□ -0.16
BRF2Q9HAW0 AC064801.2-201ENST00000625052 1303 ntBASIC14.08□□□□□ -0.16
BRF2Q9HAW0 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
BRF2Q9HAW0 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 COX5BP8-201ENST00000416911 349 ntBASIC14.07□□□□□ -0.16
BRF2Q9HAW0 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 MIR3197-201ENST00000582241 73 ntBASIC14.07□□□□□ -0.16
BRF2Q9HAW0 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 AC073413.1-201ENST00000603927 732 ntBASIC14.07□□□□□ -0.16
BRF2Q9HAW0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 AC244669.2-201ENST00000612320 853 ntBASIC14.07□□□□□ -0.16
BRF2Q9HAW0 IGHV3-72-202ENST00000621503 303 ntBASIC14.07□□□□□ -0.16
BRF2Q9HAW0 KRT8P24-201ENST00000560290 1559 ntBASIC14.07□□□□□ -0.16
BRF2Q9HAW0 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
BRF2Q9HAW0 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms