Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC18.15■□□□□ 0.5
UPF2Q9HAU5 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
UPF2Q9HAU5 HADH-202ENST00000403312 1752 ntTSL 5 BASIC18.14■□□□□ 0.5
UPF2Q9HAU5 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC18.14■□□□□ 0.5
UPF2Q9HAU5 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
UPF2Q9HAU5 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 AC073548.1-201ENST00000624088 1882 ntBASIC18.14■□□□□ 0.49
UPF2Q9HAU5 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.14■□□□□ 0.49
UPF2Q9HAU5 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 AC007969.1-201ENST00000433675 447 ntBASIC18.14■□□□□ 0.49
UPF2Q9HAU5 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 CNN2P2-201ENST00000443536 909 ntBASIC18.14■□□□□ 0.49
UPF2Q9HAU5 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 CNN2P3-201ENST00000450201 906 ntBASIC18.14■□□□□ 0.49
UPF2Q9HAU5 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 AC027369.6-201ENST00000525520 931 ntBASIC18.14■□□□□ 0.49
UPF2Q9HAU5 AC036164.1-201ENST00000570544 333 ntBASIC18.14■□□□□ 0.49
UPF2Q9HAU5 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 AL136317.3-201ENST00000618497 906 ntBASIC18.14■□□□□ 0.49
UPF2Q9HAU5 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 CETP-203ENST00000566128 1733 ntTSL 5 BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 CLK3P2-201ENST00000427566 1453 ntBASIC18.14■□□□□ 0.49
UPF2Q9HAU5 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UPF2Q9HAU5 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 TLE1P1-201ENST00000422965 589 ntBASIC18.13■□□□□ 0.49
UPF2Q9HAU5 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 AC026410.3-201ENST00000514280 936 ntBASIC18.13■□□□□ 0.49
UPF2Q9HAU5 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 CICP20-201ENST00000443330 2801 ntBASIC18.13■□□□□ 0.49
UPF2Q9HAU5 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF2Q9HAU5 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms