Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 LINC00552-201ENST00000625151 2579 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 AC015688.4-201ENST00000580780 1647 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 LST1-206ENST00000376090 689 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 LST1-209ENST00000376096 565 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 LST1-210ENST00000376099 610 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 MIR769-201ENST00000390225 118 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 LST1-214ENST00000418507 726 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 HINT2P1-201ENST00000419438 481 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 HLA-DPB2-205ENST00000435074 1188 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 EEF1DP6-201ENST00000449232 372 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 FGFR3P1-201ENST00000449999 601 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 CEP164P1-201ENST00000455142 418 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 RN7SL720P-201ENST00000488178 304 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 AC125604.1-201ENST00000496255 707 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 AC009779.1-201ENST00000551138 283 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 PRKXP1-201ENST00000561423 1122 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 NAT9-211ENST00000580632 799 ntTSL 3 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 RN7SL163P-201ENST00000583100 276 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 WDR7-208ENST00000589935 544 ntTSL 4 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 AC020922.3-201ENST00000595064 547 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 AC012044.1-201ENST00000603431 297 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 TCEAL4-213ENST00000613326 1166 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 AC091812.3-201ENST00000621362 345 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 AC027601.3-201ENST00000622907 509 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 CU633904.3-201ENST00000624042 1029 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 KRT8P28-201ENST00000433288 1390 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 CAP2P1-201ENST00000557743 1390 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 KRT8P19-201ENST00000551916 1455 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms