Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF4Q9BUZ4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF4Q9BUZ4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TRAF4Q9BUZ4 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAF4Q9BUZ4 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAF4Q9BUZ4 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAF4Q9BUZ4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAF4Q9BUZ4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAF4Q9BUZ4 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAF4Q9BUZ4 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAF4Q9BUZ4 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAF4Q9BUZ4 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAF4Q9BUZ4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAF4Q9BUZ4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAF4Q9BUZ4 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.27□□□□□ -0.28
TRAF4Q9BUZ4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
TRAF4Q9BUZ4 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAF4Q9BUZ4 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.27□□□□□ -0.28
TRAF4Q9BUZ4 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAF4Q9BUZ4 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAF4Q9BUZ4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAF4Q9BUZ4 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAF4Q9BUZ4 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 ACTBP11-201ENST00000436287 1126 ntBASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 MIR4525-201ENST00000580000 75 ntBASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 TUBB1P2-201ENST00000422712 1306 ntBASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 TUBB1P1-201ENST00000503144 1300 ntBASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF4Q9BUZ4 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 AC097376.2-205ENST00000610159 5334 ntBASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 AL355994.2-201ENST00000447882 704 ntBASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 AP001582.1-201ENST00000525856 295 ntBASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 AC079316.1-201ENST00000548397 411 ntBASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAF4Q9BUZ4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms