Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
HAPLN3Q96S86 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HAPLN3Q96S86 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HAPLN3Q96S86 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HAPLN3Q96S86 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HAPLN3Q96S86 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HAPLN3Q96S86 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.24■□□□□ 0.03
HAPLN3Q96S86 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 AC117489.1-201ENST00000625169 3217 ntBASIC15.23■□□□□ 0.03
HAPLN3Q96S86 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 MIR4783-201ENST00000580343 82 ntBASIC15.23■□□□□ 0.03
HAPLN3Q96S86 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 AL033527.4-201ENST00000641026 673 ntBASIC15.23■□□□□ 0.03
HAPLN3Q96S86 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HAPLN3Q96S86 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 INTS4P1-203ENST00000641008 3683 ntBASIC15.22■□□□□ 0.03
HAPLN3Q96S86 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 AP001267.2-201ENST00000532619 2086 ntBASIC15.22■□□□□ 0.03
HAPLN3Q96S86 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 MIR663B-201ENST00000408361 115 ntBASIC15.22■□□□□ 0.03
HAPLN3Q96S86 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.22■□□□□ 0.03
HAPLN3Q96S86 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 AL162426.1-201ENST00000624141 743 ntBASIC15.22■□□□□ 0.03
HAPLN3Q96S86 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HAPLN3Q96S86 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms