Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 AL513210.1-201ENST00000629608 234 ntBASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 AL157996.1-201ENST00000624684 2299 ntBASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP6Q96FZ7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 SPDYE17-201ENST00000412399 783 ntBASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 KRT18P64-201ENST00000434946 1219 ntBASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 SNHG9-202ENST00000564014 471 ntBASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 NCLP1-201ENST00000445357 1963 ntBASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.9□□□□□ -0.02
CHMP6Q96FZ7 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CHMP6Q96FZ7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
CHMP6Q96FZ7 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP6Q96FZ7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP6Q96FZ7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CHMP6Q96FZ7 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.89□□□□□ -0.03
CHMP6Q96FZ7 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.89□□□□□ -0.03
CHMP6Q96FZ7 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.89□□□□□ -0.03
CHMP6Q96FZ7 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.89□□□□□ -0.03
CHMP6Q96FZ7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP6Q96FZ7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP6Q96FZ7 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.89□□□□□ -0.03
CHMP6Q96FZ7 AL137783.1-201ENST00000623494 1896 ntBASIC14.89□□□□□ -0.03
CHMP6Q96FZ7 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.89□□□□□ -0.03
CHMP6Q96FZ7 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP6Q96FZ7 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CHMP6Q96FZ7 KHSRPP1-201ENST00000427983 1768 ntBASIC14.89□□□□□ -0.03
CHMP6Q96FZ7 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.89□□□□□ -0.03
CHMP6Q96FZ7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP6Q96FZ7 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.89□□□□□ -0.03
CHMP6Q96FZ7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms