Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 AC093813.1-201ENST00000605066 256 ntBASIC14.23□□□□□ -0.13
VPS33AQ96AX1 AC116165.1-201ENST00000611806 668 ntBASIC14.23□□□□□ -0.13
VPS33AQ96AX1 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VPS33AQ96AX1 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 AC011498.7-201ENST00000624986 2027 ntBASIC14.22□□□□□ -0.13
VPS33AQ96AX1 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 AL356585.2-201ENST00000625078 2396 ntBASIC14.22□□□□□ -0.13
VPS33AQ96AX1 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 SPDYE22P-201ENST00000582158 798 ntBASIC14.22□□□□□ -0.13
VPS33AQ96AX1 AL691403.2-201ENST00000618460 490 ntBASIC14.22□□□□□ -0.13
VPS33AQ96AX1 AL390754.1-201ENST00000619088 582 ntBASIC14.22□□□□□ -0.13
VPS33AQ96AX1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VPS33AQ96AX1 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 RNU1-114P-201ENST00000365297 166 ntBASIC14.21□□□□□ -0.13
VPS33AQ96AX1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 MIR1233-2-201ENST00000408138 82 ntBASIC14.21□□□□□ -0.13
VPS33AQ96AX1 MIR1233-1-201ENST00000408722 82 ntBASIC14.21□□□□□ -0.13
VPS33AQ96AX1 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms