Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 AC055811.4-201ENST00000624039 1754 ntBASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 AC079776.1-201ENST00000401540 1152 ntBASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FOXR1Q6PIV2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 TMEM14DP-201ENST00000422205 345 ntBASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 ELK1P1-201ENST00000485699 580 ntBASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 AL365330.1-201ENST00000607459 531 ntBASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
FOXR1Q6PIV2 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms