Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 HSPB1P2-201ENST00000448722 546 ntBASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 AL136301.1-201ENST00000615830 422 ntBASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 AC136759.1-202ENST00000530858 2194 ntBASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 AC126755.1-201ENST00000525846 6405 ntBASIC15.39■□□□□ 0.05
RFWD3Q6PCD5 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 TLE1P1-201ENST00000422965 589 ntBASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 AC243960.2-201ENST00000600996 747 ntBASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD3Q6PCD5 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD3Q6PCD5 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.37■□□□□ 0.05
RFWD3Q6PCD5 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD3Q6PCD5 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD3Q6PCD5 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD3Q6PCD5 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RFWD3Q6PCD5 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms