Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 AC007969.1-201ENST00000433675 447 ntBASIC15.51■□□□□ 0.07
RNF43Q68DV7 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 UPF3AP2-201ENST00000457924 1132 ntBASIC15.51■□□□□ 0.07
RNF43Q68DV7 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 AP000845.1-201ENST00000581677 2131 ntBASIC15.51■□□□□ 0.07
RNF43Q68DV7 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 AC138028.6-201ENST00000616106 1482 ntBASIC15.51■□□□□ 0.07
RNF43Q68DV7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF43Q68DV7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF43Q68DV7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF43Q68DV7 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF43Q68DV7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF43Q68DV7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF43Q68DV7 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF43Q68DV7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF43Q68DV7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF43Q68DV7 INTS4P1-203ENST00000641008 3683 ntBASIC15.5■□□□□ 0.07
RNF43Q68DV7 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF43Q68DV7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF43Q68DV7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF43Q68DV7 HINT2P1-201ENST00000419438 481 ntBASIC15.5■□□□□ 0.07
RNF43Q68DV7 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF43Q68DV7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF43Q68DV7 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF43Q68DV7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF43Q68DV7 AC005077.2-201ENST00000449786 690 ntBASIC15.5■□□□□ 0.07
RNF43Q68DV7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF43Q68DV7 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.5■□□□□ 0.07
RNF43Q68DV7 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF43Q68DV7 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF43Q68DV7 AC020914.3-201ENST00000594712 304 ntBASIC15.5■□□□□ 0.07
RNF43Q68DV7 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF43Q68DV7 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF43Q68DV7 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.5■□□□□ 0.07
RNF43Q68DV7 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF43Q68DV7 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF43Q68DV7 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF43Q68DV7 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF43Q68DV7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF43Q68DV7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF43Q68DV7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RNF43Q68DV7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF43Q68DV7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.5■□□□□ 0.07
RNF43Q68DV7 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 MTHFR-210ENST00000641407 2387 ntBASIC15.49■□□□□ 0.07
RNF43Q68DV7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 AL137783.1-201ENST00000623494 1896 ntBASIC15.49■□□□□ 0.07
RNF43Q68DV7 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms