Protein–RNA interactions for Protein: Q53SF7

COBLL1, Cordon-bleu protein-like 1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COBLL1Q53SF7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 AC106886.1-201ENST00000568660 600 ntBASIC16.09■□□□□ 0.17
COBLL1Q53SF7 PPY2P-201ENST00000582808 702 ntBASIC16.09■□□□□ 0.17
COBLL1Q53SF7 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 KRT8P4-201ENST00000509735 1454 ntBASIC16.09■□□□□ 0.17
COBLL1Q53SF7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 REXO1L6P-201ENST00000603433 1515 ntBASIC16.09■□□□□ 0.17
COBLL1Q53SF7 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COBLL1Q53SF7 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COBLL1Q53SF7 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.08■□□□□ 0.17
COBLL1Q53SF7 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COBLL1Q53SF7 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
COBLL1Q53SF7 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
COBLL1Q53SF7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COBLL1Q53SF7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COBLL1Q53SF7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 PCDHA3-202ENST00000532566 4594 ntBASIC16.08■□□□□ 0.16
COBLL1Q53SF7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 USP17L6P-201ENST00000382470 1197 ntBASIC16.08■□□□□ 0.16
COBLL1Q53SF7 MIR1202-201ENST00000408529 83 ntBASIC16.08■□□□□ 0.16
COBLL1Q53SF7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 AL157407.1-201ENST00000435784 904 ntBASIC16.08■□□□□ 0.16
COBLL1Q53SF7 AL645933.1-201ENST00000440087 609 ntBASIC16.08■□□□□ 0.16
COBLL1Q53SF7 RPL7P3-201ENST00000441388 714 ntBASIC16.08■□□□□ 0.16
COBLL1Q53SF7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 CR383656.12-201ENST00000549567 513 ntBASIC16.08■□□□□ 0.16
COBLL1Q53SF7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 AL136301.1-201ENST00000615830 422 ntBASIC16.08■□□□□ 0.16
COBLL1Q53SF7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 TMBIM7P-202ENST00000641474 1516 ntBASIC16.08■□□□□ 0.16
COBLL1Q53SF7 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COBLL1Q53SF7 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
COBLL1Q53SF7 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COBLL1Q53SF7 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
COBLL1Q53SF7 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.07■□□□□ 0.16
COBLL1Q53SF7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COBLL1Q53SF7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
COBLL1Q53SF7 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
COBLL1Q53SF7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COBLL1Q53SF7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COBLL1Q53SF7 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COBLL1Q53SF7 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.07■□□□□ 0.16
COBLL1Q53SF7 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.07■□□□□ 0.16
COBLL1Q53SF7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
COBLL1Q53SF7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.07■□□□□ 0.16
COBLL1Q53SF7 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.07■□□□□ 0.16
COBLL1Q53SF7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.07■□□□□ 0.16
COBLL1Q53SF7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COBLL1Q53SF7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.07■□□□□ 0.16
COBLL1Q53SF7 DUX4L46-201ENST00000566845 751 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms