Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 RPL8P2-201ENST00000430538 502 ntBASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 PIN4P1-201ENST00000451079 396 ntBASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 AC079112.1-201ENST00000454972 939 ntBASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 AL109837.1-201ENST00000603272 613 ntBASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 AC005632.3-201ENST00000605544 308 ntBASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 AC007881.3-201ENST00000608897 607 ntBASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CTC1Q2NKJ3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CTC1Q2NKJ3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CTC1Q2NKJ3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CTC1Q2NKJ3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.71■□□□□ 0.1
CTC1Q2NKJ3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
CTC1Q2NKJ3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
CTC1Q2NKJ3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CTC1Q2NKJ3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CTC1Q2NKJ3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CTC1Q2NKJ3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CTC1Q2NKJ3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 AC011840.2-201ENST00000563063 1520 ntBASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 AL592076.1-201ENST00000424448 303 ntBASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 AL157792.1-201ENST00000488281 530 ntBASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 AC009884.2-201ENST00000603110 324 ntBASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 MROH4P-201ENST00000431302 1578 ntBASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTC1Q2NKJ3 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 AL360270.3-201ENST00000609118 1348 ntBASIC15.69■□□□□ 0.1
CTC1Q2NKJ3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms