Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.75□□□□□ -0.21
CD47Q08722 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CD47Q08722 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.75□□□□□ -0.21
CD47Q08722 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.75□□□□□ -0.21
CD47Q08722 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.75□□□□□ -0.21
CD47Q08722 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.75□□□□□ -0.21
CD47Q08722 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.75□□□□□ -0.21
CD47Q08722 AC092337.1-201ENST00000568699 1129 ntBASIC13.75□□□□□ -0.21
CD47Q08722 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.75□□□□□ -0.21
CD47Q08722 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.75□□□□□ -0.21
CD47Q08722 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.75□□□□□ -0.21
CD47Q08722 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.75□□□□□ -0.21
CD47Q08722 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.75□□□□□ -0.21
CD47Q08722 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.75□□□□□ -0.21
CD47Q08722 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.75□□□□□ -0.21
CD47Q08722 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CD47Q08722 RN7SL832P-201ENST00000607781 1756 ntBASIC13.75□□□□□ -0.21
CD47Q08722 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 CR383656.2-201ENST00000548656 2254 ntBASIC13.75□□□□□ -0.21
CD47Q08722 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.75□□□□□ -0.21
CD47Q08722 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
CD47Q08722 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CD47Q08722 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.75□□□□□ -0.21
CD47Q08722 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD47Q08722 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
CD47Q08722 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.74□□□□□ -0.21
CD47Q08722 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.74□□□□□ -0.21
CD47Q08722 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.74□□□□□ -0.21
CD47Q08722 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CD47Q08722 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.74□□□□□ -0.21
CD47Q08722 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
CD47Q08722 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.74□□□□□ -0.21
CD47Q08722 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CD47Q08722 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.74□□□□□ -0.21
CD47Q08722 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.74□□□□□ -0.21
CD47Q08722 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.74□□□□□ -0.21
CD47Q08722 MEIS3P1-201ENST00000495167 958 ntBASIC13.74□□□□□ -0.21
CD47Q08722 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.74□□□□□ -0.21
CD47Q08722 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 AC009407.1-201ENST00000568958 598 ntBASIC13.74□□□□□ -0.21
CD47Q08722 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.74□□□□□ -0.21
CD47Q08722 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.74□□□□□ -0.21
CD47Q08722 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
CD47Q08722 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 AC008738.7-201ENST00000609744 511 ntBASIC13.74□□□□□ -0.21
CD47Q08722 AL158212.4-201ENST00000624062 1286 ntBASIC13.74□□□□□ -0.21
CD47Q08722 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.74□□□□□ -0.21
CD47Q08722 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CD47Q08722 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CD47Q08722 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.74□□□□□ -0.21
CD47Q08722 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 AL122018.1-201ENST00000446607 2310 ntBASIC13.74□□□□□ -0.21
CD47Q08722 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.74□□□□□ -0.21
CD47Q08722 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.74□□□□□ -0.21
CD47Q08722 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.74□□□□□ -0.21
CD47Q08722 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.74□□□□□ -0.21
CD47Q08722 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms