Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC17.75■□□□□ 0.43
SCN7AQ01118 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN7AQ01118 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC17.75■□□□□ 0.43
SCN7AQ01118 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC17.75■□□□□ 0.43
SCN7AQ01118 AC015909.5-201ENST00000624336 2266 ntBASIC17.75■□□□□ 0.43
SCN7AQ01118 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SCN7AQ01118 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC17.75■□□□□ 0.43
SCN7AQ01118 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.75■□□□□ 0.43
SCN7AQ01118 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCN7AQ01118 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN7AQ01118 LINC00554-201ENST00000564841 3011 ntBASIC17.75■□□□□ 0.43
SCN7AQ01118 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.75■□□□□ 0.43
SCN7AQ01118 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN7AQ01118 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN7AQ01118 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN7AQ01118 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN7AQ01118 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN7AQ01118 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCN7AQ01118 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SCN7AQ01118 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCN7AQ01118 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SCN7AQ01118 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC17.74■□□□□ 0.43
SCN7AQ01118 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCN7AQ01118 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN7AQ01118 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN7AQ01118 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC17.74■□□□□ 0.43
SCN7AQ01118 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC17.74■□□□□ 0.43
SCN7AQ01118 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SCN7AQ01118 MIR566-201ENST00000385187 94 ntBASIC17.74■□□□□ 0.43
SCN7AQ01118 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN7AQ01118 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN7AQ01118 NME6-208ENST00000435684 599 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN7AQ01118 AC063952.3-201ENST00000467756 308 ntBASIC17.74■□□□□ 0.43
SCN7AQ01118 AC083801.1-201ENST00000491689 358 ntBASIC17.74■□□□□ 0.43
SCN7AQ01118 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC17.74■□□□□ 0.43
SCN7AQ01118 AC087203.1-201ENST00000532111 1181 ntBASIC17.74■□□□□ 0.43
SCN7AQ01118 AC023968.2-201ENST00000560593 1049 ntBASIC17.74■□□□□ 0.43
SCN7AQ01118 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC17.74■□□□□ 0.43
SCN7AQ01118 AP000769.1-203ENST00000637245 208 ntBASIC17.74■□□□□ 0.43
SCN7AQ01118 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN7AQ01118 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCN7AQ01118 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN7AQ01118 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SCN7AQ01118 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.74■□□□□ 0.43
SCN7AQ01118 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC17.74■□□□□ 0.43
SCN7AQ01118 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN7AQ01118 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN7AQ01118 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN7AQ01118 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN7AQ01118 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN7AQ01118 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCN7AQ01118 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SCN7AQ01118 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SCN7AQ01118 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SCN7AQ01118 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCN7AQ01118 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCN7AQ01118 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN7AQ01118 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN7AQ01118 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCN7AQ01118 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN7AQ01118 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC17.74■□□□□ 0.43
SCN7AQ01118 USP17L6P-201ENST00000382470 1197 ntBASIC17.74■□□□□ 0.43
SCN7AQ01118 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC17.74■□□□□ 0.43
SCN7AQ01118 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC17.74■□□□□ 0.43
SCN7AQ01118 PSAT1P2-201ENST00000426107 972 ntBASIC17.74■□□□□ 0.43
SCN7AQ01118 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC17.74■□□□□ 0.43
SCN7AQ01118 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC17.74■□□□□ 0.43
SCN7AQ01118 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC17.74■□□□□ 0.43
SCN7AQ01118 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCN7AQ01118 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCN7AQ01118 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN7AQ01118 COQ4-204ENST00000608951 781 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN7AQ01118 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCN7AQ01118 AC090505.1-201ENST00000430515 1834 ntBASIC17.74■□□□□ 0.43
SCN7AQ01118 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SCN7AQ01118 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN7AQ01118 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN7AQ01118 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN7AQ01118 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN7AQ01118 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN7AQ01118 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SCN7AQ01118 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SCN7AQ01118 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
SCN7AQ01118 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SCN7AQ01118 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN7AQ01118 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN7AQ01118 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN7AQ01118 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN7AQ01118 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.73■□□□□ 0.43
SCN7AQ01118 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN7AQ01118 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN7AQ01118 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SCN7AQ01118 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN7AQ01118 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.73■□□□□ 0.43
SCN7AQ01118 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC17.73■□□□□ 0.43
SCN7AQ01118 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC17.73■□□□□ 0.43
SCN7AQ01118 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC17.73■□□□□ 0.43
SCN7AQ01118 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.73■□□□□ 0.43
SCN7AQ01118 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC17.73■□□□□ 0.43
SCN7AQ01118 AL512310.5-201ENST00000551999 515 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms