Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL1Q00532 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL1Q00532 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CDKL1Q00532 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL1Q00532 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL1Q00532 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CDKL1Q00532 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL1Q00532 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL1Q00532 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CDKL1Q00532 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL1Q00532 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CDKL1Q00532 AC005562.1-201ENST00000583030 3219 ntBASIC14.54□□□□□ -0.08
CDKL1Q00532 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL1Q00532 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL1Q00532 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL1Q00532 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL1Q00532 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL1Q00532 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CDKL1Q00532 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.53□□□□□ -0.08
CDKL1Q00532 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.53□□□□□ -0.08
CDKL1Q00532 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.53□□□□□ -0.08
CDKL1Q00532 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDKL1Q00532 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CDKL1Q00532 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.53□□□□□ -0.08
CDKL1Q00532 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.53□□□□□ -0.08
CDKL1Q00532 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDKL1Q00532 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CDKL1Q00532 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CDKL1Q00532 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDKL1Q00532 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDKL1Q00532 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
CDKL1Q00532 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.53□□□□□ -0.08
CDKL1Q00532 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.53□□□□□ -0.08
CDKL1Q00532 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.53□□□□□ -0.08
CDKL1Q00532 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.53□□□□□ -0.08
CDKL1Q00532 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDKL1Q00532 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.53□□□□□ -0.08
CDKL1Q00532 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.53□□□□□ -0.08
CDKL1Q00532 AC106760.1-201ENST00000508690 800 ntBASIC14.53□□□□□ -0.08
CDKL1Q00532 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.53□□□□□ -0.08
CDKL1Q00532 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.53□□□□□ -0.08
CDKL1Q00532 AC025279.2-201ENST00000569730 653 ntBASIC14.53□□□□□ -0.08
CDKL1Q00532 BX088702.1-201ENST00000610784 235 ntBASIC14.53□□□□□ -0.08
CDKL1Q00532 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.53□□□□□ -0.08
CDKL1Q00532 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKL1Q00532 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDKL1Q00532 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDKL1Q00532 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.53□□□□□ -0.08
CDKL1Q00532 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDKL1Q00532 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
CDKL1Q00532 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CDKL1Q00532 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL1Q00532 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CDKL1Q00532 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL1Q00532 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL1Q00532 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.52□□□□□ -0.08
CDKL1Q00532 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.52□□□□□ -0.08
CDKL1Q00532 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.52□□□□□ -0.08
CDKL1Q00532 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL1Q00532 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL1Q00532 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL1Q00532 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL1Q00532 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL1Q00532 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL1Q00532 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL1Q00532 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL1Q00532 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL1Q00532 AP000593.2-201ENST00000542775 1433 ntBASIC14.52□□□□□ -0.08
CDKL1Q00532 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL1Q00532 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.52□□□□□ -0.08
CDKL1Q00532 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.52□□□□□ -0.08
CDKL1Q00532 AL136172.1-201ENST00000598590 1394 ntBASIC14.52□□□□□ -0.08
CDKL1Q00532 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.52□□□□□ -0.08
CDKL1Q00532 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKL1Q00532 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.52□□□□□ -0.08
CDKL1Q00532 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKL1Q00532 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDKL1Q00532 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms