Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX3P78415 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.22■□□□□ 0.35
IRX3P78415 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX3P78415 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IRX3P78415 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IRX3P78415 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.21■□□□□ 0.35
IRX3P78415 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
IRX3P78415 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
IRX3P78415 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IRX3P78415 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.21■□□□□ 0.35
IRX3P78415 AC023908.3-201ENST00000564211 3047 ntBASIC17.21■□□□□ 0.35
IRX3P78415 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IRX3P78415 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IRX3P78415 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.21■□□□□ 0.35
IRX3P78415 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IRX3P78415 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.21■□□□□ 0.35
IRX3P78415 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IRX3P78415 FAM90A7P-201ENST00000382628 1395 ntBASIC17.21■□□□□ 0.35
IRX3P78415 FAM90A23P-201ENST00000400136 1395 ntBASIC17.21■□□□□ 0.35
IRX3P78415 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IRX3P78415 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IRX3P78415 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
IRX3P78415 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
IRX3P78415 FGFR3P1-201ENST00000449999 601 ntBASIC17.21■□□□□ 0.35
IRX3P78415 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.21■□□□□ 0.35
IRX3P78415 POU5F1P2-201ENST00000521750 823 ntBASIC17.21■□□□□ 0.35
IRX3P78415 IQSEC3P1-201ENST00000538799 536 ntBASIC17.21■□□□□ 0.35
IRX3P78415 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
IRX3P78415 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.21■□□□□ 0.35
IRX3P78415 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IRX3P78415 MIR3147-201ENST00000577811 66 ntBASIC17.21■□□□□ 0.35
IRX3P78415 MIR4754-201ENST00000582477 89 ntBASIC17.21■□□□□ 0.35
IRX3P78415 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.21■□□□□ 0.35
IRX3P78415 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IRX3P78415 MIR6720-201ENST00000611664 98 ntBASIC17.21■□□□□ 0.35
IRX3P78415 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.21■□□□□ 0.35
IRX3P78415 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.21■□□□□ 0.35
IRX3P78415 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC17.21■□□□□ 0.35
IRX3P78415 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC17.21■□□□□ 0.35
IRX3P78415 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IRX3P78415 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.21■□□□□ 0.35
IRX3P78415 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
IRX3P78415 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IRX3P78415 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.21■□□□□ 0.35
IRX3P78415 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
IRX3P78415 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
IRX3P78415 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
IRX3P78415 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.2■□□□□ 0.34
IRX3P78415 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.2■□□□□ 0.34
IRX3P78415 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.2■□□□□ 0.34
IRX3P78415 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IRX3P78415 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IRX3P78415 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IRX3P78415 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.2■□□□□ 0.34
IRX3P78415 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IRX3P78415 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IRX3P78415 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IRX3P78415 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IRX3P78415 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.2■□□□□ 0.34
IRX3P78415 NOC2LP1-201ENST00000450578 752 ntBASIC17.2■□□□□ 0.34
IRX3P78415 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
IRX3P78415 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.2■□□□□ 0.34
IRX3P78415 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
IRX3P78415 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.2■□□□□ 0.34
IRX3P78415 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.2■□□□□ 0.34
IRX3P78415 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.2■□□□□ 0.34
IRX3P78415 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.2■□□□□ 0.34
IRX3P78415 Z98259.2-201ENST00000641583 609 ntBASIC17.2■□□□□ 0.34
IRX3P78415 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
IRX3P78415 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.2■□□□□ 0.34
IRX3P78415 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.2■□□□□ 0.34
IRX3P78415 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IRX3P78415 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IRX3P78415 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IRX3P78415 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IRX3P78415 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC17.2■□□□□ 0.34
IRX3P78415 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.2■□□□□ 0.34
IRX3P78415 TBC1D3J-201ENST00000620719 1426 ntBASIC17.2■□□□□ 0.34
IRX3P78415 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IRX3P78415 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IRX3P78415 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IRX3P78415 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IRX3P78415 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
IRX3P78415 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.2■□□□□ 0.34
IRX3P78415 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IRX3P78415 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.2■□□□□ 0.34
IRX3P78415 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IRX3P78415 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.19■□□□□ 0.34
IRX3P78415 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.19■□□□□ 0.34
IRX3P78415 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.19■□□□□ 0.34
IRX3P78415 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
IRX3P78415 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IRX3P78415 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.19■□□□□ 0.34
IRX3P78415 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IRX3P78415 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IRX3P78415 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.19■□□□□ 0.34
IRX3P78415 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IRX3P78415 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
IRX3P78415 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
IRX3P78415 LILRP1-201ENST00000444199 1370 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms