Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.93□□□□□ -0.18
RAE1P78406 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.93□□□□□ -0.18
RAE1P78406 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.93□□□□□ -0.18
RAE1P78406 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAE1P78406 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.93□□□□□ -0.18
RAE1P78406 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.93□□□□□ -0.18
RAE1P78406 AP000812.2-201ENST00000538934 718 ntBASIC13.93□□□□□ -0.18
RAE1P78406 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.93□□□□□ -0.18
RAE1P78406 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.93□□□□□ -0.18
RAE1P78406 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.93□□□□□ -0.18
RAE1P78406 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.93□□□□□ -0.18
RAE1P78406 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.93□□□□□ -0.18
RAE1P78406 PPY2P-201ENST00000582808 702 ntBASIC13.93□□□□□ -0.18
RAE1P78406 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAE1P78406 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.93□□□□□ -0.18
RAE1P78406 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.93□□□□□ -0.18
RAE1P78406 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAE1P78406 AC008825.2-201ENST00000603374 718 ntBASIC13.93□□□□□ -0.18
RAE1P78406 ZACNP1-201ENST00000612259 710 ntBASIC13.93□□□□□ -0.18
RAE1P78406 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.93□□□□□ -0.18
RAE1P78406 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAE1P78406 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAE1P78406 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
RAE1P78406 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
RAE1P78406 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAE1P78406 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAE1P78406 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAE1P78406 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAE1P78406 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RAE1P78406 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAE1P78406 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RAE1P78406 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RAE1P78406 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RAE1P78406 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAE1P78406 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAE1P78406 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAE1P78406 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAE1P78406 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.92□□□□□ -0.18
RAE1P78406 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAE1P78406 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.92□□□□□ -0.18
RAE1P78406 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAE1P78406 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAE1P78406 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAE1P78406 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAE1P78406 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.92□□□□□ -0.18
RAE1P78406 PDIA3P1-201ENST00000471856 1510 ntBASIC13.92□□□□□ -0.18
RAE1P78406 FLJ16779-201ENST00000612722 7638 ntBASIC13.92□□□□□ -0.18
RAE1P78406 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAE1P78406 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAE1P78406 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAE1P78406 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAE1P78406 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAE1P78406 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.92□□□□□ -0.18
RAE1P78406 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAE1P78406 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAE1P78406 AL035633.1-201ENST00000406139 838 ntBASIC13.92□□□□□ -0.18
RAE1P78406 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.92□□□□□ -0.18
RAE1P78406 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.92□□□□□ -0.18
RAE1P78406 TMEM198B-204ENST00000484016 896 ntBASIC13.92□□□□□ -0.18
RAE1P78406 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.92□□□□□ -0.18
RAE1P78406 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.92□□□□□ -0.18
RAE1P78406 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.92□□□□□ -0.18
RAE1P78406 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAE1P78406 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.92□□□□□ -0.18
RAE1P78406 RHOXF1P1-202ENST00000635473 501 ntBASIC13.92□□□□□ -0.18
RAE1P78406 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.92□□□□□ -0.18
RAE1P78406 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAE1P78406 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAE1P78406 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAE1P78406 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RAE1P78406 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.92□□□□□ -0.18
RAE1P78406 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.92□□□□□ -0.18
RAE1P78406 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAE1P78406 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.92□□□□□ -0.18
RAE1P78406 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAE1P78406 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RAE1P78406 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.92□□□□□ -0.18
RAE1P78406 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.92□□□□□ -0.18
RAE1P78406 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAE1P78406 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
RAE1P78406 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RAE1P78406 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RAE1P78406 MBLAC2-202ENST00000514906 1936 ntBASIC13.92□□□□□ -0.18
RAE1P78406 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RAE1P78406 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAE1P78406 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAE1P78406 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAE1P78406 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RAE1P78406 AHCYP2-201ENST00000430630 1300 ntBASIC13.91□□□□□ -0.18
RAE1P78406 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.91□□□□□ -0.18
RAE1P78406 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.91□□□□□ -0.18
RAE1P78406 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.91□□□□□ -0.18
RAE1P78406 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.91□□□□□ -0.18
RAE1P78406 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAE1P78406 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAE1P78406 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAE1P78406 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAE1P78406 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAE1P78406 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAE1P78406 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms