Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
YBX1P67809 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 AC068587.6-202ENST00000641839 5619 ntBASIC14.35□□□□□ -0.11
YBX1P67809 CICP20-201ENST00000443330 2801 ntBASIC14.35□□□□□ -0.11
YBX1P67809 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.35□□□□□ -0.11
YBX1P67809 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
YBX1P67809 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.35□□□□□ -0.11
YBX1P67809 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.35□□□□□ -0.11
YBX1P67809 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.35□□□□□ -0.11
YBX1P67809 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.35□□□□□ -0.11
YBX1P67809 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.35□□□□□ -0.11
YBX1P67809 AC131206.1-201ENST00000538078 1211 ntBASIC14.35□□□□□ -0.11
YBX1P67809 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
YBX1P67809 AL583810.1-201ENST00000553344 1045 ntBASIC14.35□□□□□ -0.11
YBX1P67809 PPY2P-201ENST00000582808 702 ntBASIC14.35□□□□□ -0.11
YBX1P67809 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.35□□□□□ -0.11
YBX1P67809 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.35□□□□□ -0.11
YBX1P67809 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.35□□□□□ -0.11
YBX1P67809 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.35□□□□□ -0.11
YBX1P67809 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.35□□□□□ -0.11
YBX1P67809 AC130686.1-201ENST00000622936 2466 ntBASIC14.35□□□□□ -0.11
YBX1P67809 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
YBX1P67809 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.35□□□□□ -0.11
YBX1P67809 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
YBX1P67809 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
YBX1P67809 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
YBX1P67809 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
YBX1P67809 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
YBX1P67809 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
YBX1P67809 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
YBX1P67809 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
YBX1P67809 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
YBX1P67809 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
YBX1P67809 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
YBX1P67809 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.34□□□□□ -0.11
YBX1P67809 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
YBX1P67809 CHMP1AP1-201ENST00000445563 662 ntBASIC14.34□□□□□ -0.11
YBX1P67809 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
YBX1P67809 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.34□□□□□ -0.11
YBX1P67809 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.34□□□□□ -0.11
YBX1P67809 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.34□□□□□ -0.11
YBX1P67809 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.34□□□□□ -0.11
YBX1P67809 AL358472.3-201ENST00000608147 415 ntBASIC14.34□□□□□ -0.11
YBX1P67809 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.34□□□□□ -0.11
YBX1P67809 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
YBX1P67809 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
YBX1P67809 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
YBX1P67809 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.34□□□□□ -0.11
YBX1P67809 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
YBX1P67809 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
YBX1P67809 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
YBX1P67809 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
YBX1P67809 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.34□□□□□ -0.11
YBX1P67809 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
YBX1P67809 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.34□□□□□ -0.11
YBX1P67809 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.34□□□□□ -0.11
YBX1P67809 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.34□□□□□ -0.11
YBX1P67809 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.34□□□□□ -0.11
YBX1P67809 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
YBX1P67809 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
YBX1P67809 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
YBX1P67809 AGGF1P1-201ENST00000509500 2073 ntBASIC14.34□□□□□ -0.11
YBX1P67809 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
YBX1P67809 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.33□□□□□ -0.11
YBX1P67809 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
YBX1P67809 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
YBX1P67809 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
YBX1P67809 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.33□□□□□ -0.11
YBX1P67809 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
YBX1P67809 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
YBX1P67809 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
YBX1P67809 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
YBX1P67809 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
YBX1P67809 AL023775.1-201ENST00000454907 1746 ntBASIC14.33□□□□□ -0.12
YBX1P67809 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 243.1 ms