Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.46□□□□□ -0.25
CXCR4P61073 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.46□□□□□ -0.25
CXCR4P61073 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.46□□□□□ -0.25
CXCR4P61073 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.46□□□□□ -0.25
CXCR4P61073 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.46□□□□□ -0.25
CXCR4P61073 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.46□□□□□ -0.25
CXCR4P61073 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.46□□□□□ -0.25
CXCR4P61073 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.46□□□□□ -0.25
CXCR4P61073 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.46□□□□□ -0.25
CXCR4P61073 KRT18P8-201ENST00000581937 1246 ntBASIC13.46□□□□□ -0.25
CXCR4P61073 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.46□□□□□ -0.25
CXCR4P61073 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.46□□□□□ -0.25
CXCR4P61073 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.46□□□□□ -0.25
CXCR4P61073 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.46□□□□□ -0.25
CXCR4P61073 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.46□□□□□ -0.25
CXCR4P61073 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CXCR4P61073 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CXCR4P61073 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.46□□□□□ -0.26
CXCR4P61073 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CXCR4P61073 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CXCR4P61073 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.46□□□□□ -0.26
CXCR4P61073 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.46□□□□□ -0.26
CXCR4P61073 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
CXCR4P61073 AL158070.2-201ENST00000623713 1621 ntBASIC13.46□□□□□ -0.26
CXCR4P61073 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
CXCR4P61073 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CXCR4P61073 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.46□□□□□ -0.26
CXCR4P61073 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
CXCR4P61073 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
CXCR4P61073 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
CXCR4P61073 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
CXCR4P61073 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.45□□□□□ -0.26
CXCR4P61073 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CXCR4P61073 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CXCR4P61073 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CXCR4P61073 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CXCR4P61073 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.45□□□□□ -0.26
CXCR4P61073 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
CXCR4P61073 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.45□□□□□ -0.26
CXCR4P61073 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CXCR4P61073 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.45□□□□□ -0.26
CXCR4P61073 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.45□□□□□ -0.26
CXCR4P61073 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.45□□□□□ -0.26
CXCR4P61073 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 TIMM17BP1-201ENST00000545713 516 ntBASIC13.45□□□□□ -0.26
CXCR4P61073 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.45□□□□□ -0.26
CXCR4P61073 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.45□□□□□ -0.26
CXCR4P61073 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CXCR4P61073 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.45□□□□□ -0.26
CXCR4P61073 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.45□□□□□ -0.26
CXCR4P61073 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.45□□□□□ -0.26
CXCR4P61073 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.45□□□□□ -0.26
CXCR4P61073 AC073592.8-201ENST00000624126 511 ntBASIC13.45□□□□□ -0.26
CXCR4P61073 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.45□□□□□ -0.26
CXCR4P61073 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CXCR4P61073 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.45□□□□□ -0.26
CXCR4P61073 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.45□□□□□ -0.26
CXCR4P61073 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.45□□□□□ -0.26
CXCR4P61073 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.45□□□□□ -0.26
CXCR4P61073 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.45□□□□□ -0.26
CXCR4P61073 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CXCR4P61073 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CXCR4P61073 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CXCR4P61073 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CXCR4P61073 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CXCR4P61073 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CXCR4P61073 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms