Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
AP3S2P59780 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.7□□□□□ -0.38
AP3S2P59780 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
AP3S2P59780 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.7□□□□□ -0.38
AP3S2P59780 AC024075.2-201ENST00000598112 1473 ntBASIC12.7□□□□□ -0.38
AP3S2P59780 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
AP3S2P59780 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.7□□□□□ -0.38
AP3S2P59780 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.7□□□□□ -0.38
AP3S2P59780 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.7□□□□□ -0.38
AP3S2P59780 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
AP3S2P59780 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
AP3S2P59780 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
AP3S2P59780 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.7□□□□□ -0.38
AP3S2P59780 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.7□□□□□ -0.38
AP3S2P59780 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
AP3S2P59780 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.7□□□□□ -0.38
AP3S2P59780 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.7□□□□□ -0.38
AP3S2P59780 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.7□□□□□ -0.38
AP3S2P59780 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S2P59780 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
AP3S2P59780 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
AP3S2P59780 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.69□□□□□ -0.38
AP3S2P59780 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.69□□□□□ -0.38
AP3S2P59780 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.69□□□□□ -0.38
AP3S2P59780 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S2P59780 KHSRPP1-201ENST00000427983 1768 ntBASIC12.69□□□□□ -0.38
AP3S2P59780 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.69□□□□□ -0.38
AP3S2P59780 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.69□□□□□ -0.38
AP3S2P59780 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
AP3S2P59780 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S2P59780 AGAP10P-201ENST00000454844 2418 ntBASIC12.69□□□□□ -0.38
AP3S2P59780 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S2P59780 NCLP1-201ENST00000445357 1963 ntBASIC12.69□□□□□ -0.38
AP3S2P59780 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S2P59780 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.69□□□□□ -0.38
AP3S2P59780 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.69□□□□□ -0.38
AP3S2P59780 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S2P59780 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S2P59780 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.69□□□□□ -0.38
AP3S2P59780 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.69□□□□□ -0.38
AP3S2P59780 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
AP3S2P59780 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S2P59780 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.69□□□□□ -0.38
AP3S2P59780 AC074338.1-201ENST00000416825 156 ntBASIC12.69□□□□□ -0.38
AP3S2P59780 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.69□□□□□ -0.38
AP3S2P59780 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
AP3S2P59780 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.69□□□□□ -0.38
AP3S2P59780 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.69□□□□□ -0.38
AP3S2P59780 RNA5SP415-201ENST00000517246 115 ntBASIC12.69□□□□□ -0.38
AP3S2P59780 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S2P59780 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.69□□□□□ -0.38
AP3S2P59780 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.69□□□□□ -0.38
AP3S2P59780 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S2P59780 AC018845.2-201ENST00000568326 409 ntBASIC12.69□□□□□ -0.38
AP3S2P59780 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.69□□□□□ -0.38
AP3S2P59780 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.69□□□□□ -0.38
AP3S2P59780 DLX4-206ENST00000611342 1662 ntBASIC12.69□□□□□ -0.38
AP3S2P59780 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S2P59780 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.69□□□□□ -0.38
AP3S2P59780 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S2P59780 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.69□□□□□ -0.38
AP3S2P59780 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.69□□□□□ -0.38
AP3S2P59780 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S2P59780 Z97205.2-201ENST00000564697 1639 ntBASIC12.69□□□□□ -0.38
AP3S2P59780 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S2P59780 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S2P59780 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S2P59780 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.69□□□□□ -0.38
AP3S2P59780 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
AP3S2P59780 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S2P59780 KRT8P12-202ENST00000472924 1397 ntBASIC12.69□□□□□ -0.38
AP3S2P59780 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.68□□□□□ -0.38
AP3S2P59780 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
AP3S2P59780 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
AP3S2P59780 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.68□□□□□ -0.38
AP3S2P59780 AP002761.4-201ENST00000565433 3361 ntBASIC12.68□□□□□ -0.38
AP3S2P59780 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.68□□□□□ -0.38
AP3S2P59780 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.68□□□□□ -0.38
AP3S2P59780 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.68□□□□□ -0.38
AP3S2P59780 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.68□□□□□ -0.38
AP3S2P59780 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.68□□□□□ -0.38
AP3S2P59780 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms