Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 AL391280.1-201ENST00000506969 1062 ntBASIC13.09□□□□□ -0.31
SLC25A1P53007 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.09□□□□□ -0.31
SLC25A1P53007 AC023794.5-201ENST00000564380 2157 ntBASIC13.09□□□□□ -0.31
SLC25A1P53007 AC140912.1-201ENST00000577171 1054 ntBASIC13.09□□□□□ -0.31
SLC25A1P53007 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SLC25A1P53007 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.09□□□□□ -0.31
SLC25A1P53007 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.09□□□□□ -0.31
SLC25A1P53007 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.09□□□□□ -0.31
SLC25A1P53007 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SLC25A1P53007 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 AC089987.1-201ENST00000551654 2209 ntBASIC13.09□□□□□ -0.31
SLC25A1P53007 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.09□□□□□ -0.31
SLC25A1P53007 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
SLC25A1P53007 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
SLC25A1P53007 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 AC134312.5-201ENST00000568031 1313 ntBASIC13.09□□□□□ -0.31
SLC25A1P53007 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
SLC25A1P53007 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SLC25A1P53007 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SLC25A1P53007 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SLC25A1P53007 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.31
SLC25A1P53007 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
SLC25A1P53007 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.08□□□□□ -0.32
SLC25A1P53007 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.08□□□□□ -0.32
SLC25A1P53007 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.08□□□□□ -0.32
SLC25A1P53007 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.08□□□□□ -0.32
SLC25A1P53007 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.08□□□□□ -0.32
SLC25A1P53007 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.08□□□□□ -0.32
SLC25A1P53007 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SLC25A1P53007 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SLC25A1P53007 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 PTP4A1P2-201ENST00000546033 454 ntBASIC13.08□□□□□ -0.32
SLC25A1P53007 AC027237.1-201ENST00000560942 655 ntBASIC13.08□□□□□ -0.32
SLC25A1P53007 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.08□□□□□ -0.32
SLC25A1P53007 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 LINC02560-201ENST00000596379 459 ntBASIC13.08□□□□□ -0.32
SLC25A1P53007 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
SLC25A1P53007 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.08□□□□□ -0.32
SLC25A1P53007 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
SLC25A1P53007 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.08□□□□□ -0.32
SLC25A1P53007 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.08□□□□□ -0.32
SLC25A1P53007 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.08□□□□□ -0.32
SLC25A1P53007 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
SLC25A1P53007 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 MSTO2P-201ENST00000314835 1709 ntBASIC13.08□□□□□ -0.32
SLC25A1P53007 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC25A1P53007 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 KRT8P28-201ENST00000433288 1390 ntBASIC13.07□□□□□ -0.32
SLC25A1P53007 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.07□□□□□ -0.32
SLC25A1P53007 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
SLC25A1P53007 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.07□□□□□ -0.32
SLC25A1P53007 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SLC25A1P53007 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
SLC25A1P53007 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 AC009093.10-201ENST00000641956 1442 ntBASIC13.07□□□□□ -0.32
SLC25A1P53007 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.07□□□□□ -0.32
SLC25A1P53007 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.07□□□□□ -0.32
SLC25A1P53007 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC25A1P53007 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms