Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RAB28P51157 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 AC018735.1-201ENST00000437208 1502 ntBASIC14.2□□□□□ -0.14
RAB28P51157 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RAB28P51157 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB28P51157 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB28P51157 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RAB28P51157 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RAB28P51157 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RAB28P51157 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RAB28P51157 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB28P51157 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB28P51157 AC004898.1-201ENST00000451057 766 ntBASIC14.19□□□□□ -0.14
RAB28P51157 RNMTL1P1-201ENST00000454103 560 ntBASIC14.19□□□□□ -0.14
RAB28P51157 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB28P51157 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.19□□□□□ -0.14
RAB28P51157 AC126915.1-201ENST00000522847 1038 ntBASIC14.19□□□□□ -0.14
RAB28P51157 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RAB28P51157 AC027237.1-201ENST00000560942 655 ntBASIC14.19□□□□□ -0.14
RAB28P51157 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB28P51157 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB28P51157 AC005324.6-201ENST00000587972 613 ntBASIC14.19□□□□□ -0.14
RAB28P51157 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 BNIP3P13-201ENST00000599968 566 ntBASIC14.19□□□□□ -0.14
RAB28P51157 AL118558.3-201ENST00000607414 1079 ntBASIC14.19□□□□□ -0.14
RAB28P51157 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB28P51157 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RAB28P51157 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
RAB28P51157 AP001267.2-201ENST00000532619 2086 ntBASIC14.19□□□□□ -0.14
RAB28P51157 AC015656.1-201ENST00000624209 3578 ntBASIC14.19□□□□□ -0.14
RAB28P51157 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
RAB28P51157 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
RAB28P51157 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RAB28P51157 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB28P51157 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RAB28P51157 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RAB28P51157 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB28P51157 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RAB28P51157 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB28P51157 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB28P51157 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
RAB28P51157 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB28P51157 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB28P51157 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB28P51157 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RAB28P51157 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB28P51157 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB28P51157 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB28P51157 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB28P51157 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB28P51157 AC215219.1-201ENST00000400706 1817 ntBASIC14.18□□□□□ -0.14
RAB28P51157 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB28P51157 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB28P51157 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB28P51157 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB28P51157 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB28P51157 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB28P51157 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB28P51157 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
RAB28P51157 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB28P51157 AC006033.1-201ENST00000440505 426 ntBASIC14.18□□□□□ -0.14
RAB28P51157 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms