Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.29■□□□□ 0.36
MRE11P49959 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRE11P49959 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRE11P49959 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MRE11P49959 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MRE11P49959 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.29■□□□□ 0.36
MRE11P49959 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRE11P49959 PCDHB18P-202ENST00000526308 3197 ntBASIC17.29■□□□□ 0.36
MRE11P49959 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC17.29■□□□□ 0.36
MRE11P49959 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.29■□□□□ 0.36
MRE11P49959 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
MRE11P49959 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRE11P49959 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRE11P49959 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRE11P49959 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MRE11P49959 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
MRE11P49959 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC17.28■□□□□ 0.36
MRE11P49959 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MRE11P49959 AP002761.4-201ENST00000565433 3361 ntBASIC17.28■□□□□ 0.36
MRE11P49959 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC17.28■□□□□ 0.36
MRE11P49959 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MRE11P49959 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 AC104457.1-201ENST00000401024 814 ntBASIC17.28■□□□□ 0.36
MRE11P49959 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
MRE11P49959 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.28■□□□□ 0.36
MRE11P49959 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
MRE11P49959 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.28■□□□□ 0.36
MRE11P49959 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
MRE11P49959 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
MRE11P49959 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.28■□□□□ 0.36
MRE11P49959 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
MRE11P49959 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.28■□□□□ 0.36
MRE11P49959 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.28■□□□□ 0.36
MRE11P49959 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.28■□□□□ 0.36
MRE11P49959 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC17.28■□□□□ 0.36
MRE11P49959 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.28■□□□□ 0.36
MRE11P49959 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC17.28■□□□□ 0.36
MRE11P49959 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MRE11P49959 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC17.28■□□□□ 0.36
MRE11P49959 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MRE11P49959 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC17.28■□□□□ 0.36
MRE11P49959 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
MRE11P49959 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRE11P49959 LILRP1-201ENST00000444199 1370 ntBASIC17.28■□□□□ 0.36
MRE11P49959 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRE11P49959 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
MRE11P49959 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRE11P49959 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRE11P49959 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRE11P49959 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRE11P49959 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRE11P49959 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
MRE11P49959 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRE11P49959 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
MRE11P49959 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.27■□□□□ 0.36
MRE11P49959 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
MRE11P49959 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.27■□□□□ 0.36
MRE11P49959 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.27■□□□□ 0.36
MRE11P49959 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MRE11P49959 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
MRE11P49959 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRE11P49959 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.27■□□□□ 0.36
MRE11P49959 RN7SL589P-201ENST00000481268 310 ntBASIC17.27■□□□□ 0.36
MRE11P49959 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MRE11P49959 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.27■□□□□ 0.36
MRE11P49959 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.27■□□□□ 0.36
MRE11P49959 AC026150.2-201ENST00000564693 1156 ntBASIC17.27■□□□□ 0.36
MRE11P49959 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRE11P49959 AC132938.2-201ENST00000579188 680 ntBASIC17.27■□□□□ 0.36
MRE11P49959 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MRE11P49959 AC084121.4-201ENST00000641598 221 ntBASIC17.27■□□□□ 0.36
MRE11P49959 AL591163.1-201ENST00000641757 987 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms