Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABRA4P48169 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GABRA4P48169 KRT8P21-201ENST00000430398 1491 ntBASIC13.88□□□□□ -0.19
GABRA4P48169 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.88□□□□□ -0.19
GABRA4P48169 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.88□□□□□ -0.19
GABRA4P48169 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.88□□□□□ -0.19
GABRA4P48169 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABRA4P48169 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABRA4P48169 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
GABRA4P48169 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GABRA4P48169 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GABRA4P48169 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABRA4P48169 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABRA4P48169 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GABRA4P48169 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABRA4P48169 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABRA4P48169 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.88□□□□□ -0.19
GABRA4P48169 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.88□□□□□ -0.19
GABRA4P48169 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.88□□□□□ -0.19
GABRA4P48169 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.88□□□□□ -0.19
GABRA4P48169 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.88□□□□□ -0.19
GABRA4P48169 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
GABRA4P48169 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.88□□□□□ -0.19
GABRA4P48169 PGAM1P5-201ENST00000548011 764 ntBASIC13.88□□□□□ -0.19
GABRA4P48169 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.88□□□□□ -0.19
GABRA4P48169 SORD2P-201ENST00000558556 1069 ntBASIC13.88□□□□□ -0.19
GABRA4P48169 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GABRA4P48169 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.88□□□□□ -0.19
GABRA4P48169 AC091812.3-201ENST00000621362 345 ntBASIC13.88□□□□□ -0.19
GABRA4P48169 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.88□□□□□ -0.19
GABRA4P48169 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
GABRA4P48169 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GABRA4P48169 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
GABRA4P48169 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.88□□□□□ -0.19
GABRA4P48169 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GABRA4P48169 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
GABRA4P48169 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
GABRA4P48169 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABRA4P48169 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABRA4P48169 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABRA4P48169 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABRA4P48169 AHCYP4-201ENST00000419201 1315 ntBASIC13.88□□□□□ -0.19
GABRA4P48169 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
GABRA4P48169 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABRA4P48169 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
GABRA4P48169 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
GABRA4P48169 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 AC215219.1-201ENST00000400706 1817 ntBASIC13.87□□□□□ -0.19
GABRA4P48169 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.87□□□□□ -0.19
GABRA4P48169 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
GABRA4P48169 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
GABRA4P48169 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
GABRA4P48169 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
GABRA4P48169 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
GABRA4P48169 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.87□□□□□ -0.19
GABRA4P48169 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
GABRA4P48169 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.87□□□□□ -0.19
GABRA4P48169 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
GABRA4P48169 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
GABRA4P48169 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
GABRA4P48169 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.87□□□□□ -0.19
GABRA4P48169 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.87□□□□□ -0.19
GABRA4P48169 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.87□□□□□ -0.19
GABRA4P48169 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.87□□□□□ -0.19
GABRA4P48169 AC022447.6-201ENST00000515522 438 ntBASIC13.87□□□□□ -0.19
GABRA4P48169 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.87□□□□□ -0.19
GABRA4P48169 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.87□□□□□ -0.19
GABRA4P48169 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.87□□□□□ -0.19
GABRA4P48169 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.87□□□□□ -0.19
GABRA4P48169 NAP1L6-202ENST00000641404 1222 ntBASIC13.87□□□□□ -0.19
GABRA4P48169 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.87□□□□□ -0.19
GABRA4P48169 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.87□□□□□ -0.19
GABRA4P48169 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.87□□□□□ -0.19
GABRA4P48169 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GABRA4P48169 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
GABRA4P48169 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.86□□□□□ -0.19
GABRA4P48169 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms