Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SLC6A12P48065 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.17□□□□□ -0.14
SLC6A12P48065 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SLC6A12P48065 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC6A12P48065 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SLC6A12P48065 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SLC6A12P48065 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 OR2I1P-210ENST00000642037 4691 ntBASIC14.16□□□□□ -0.14
SLC6A12P48065 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SLC6A12P48065 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SLC6A12P48065 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SLC6A12P48065 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 AC005034.1-201ENST00000426657 489 ntBASIC14.16□□□□□ -0.14
SLC6A12P48065 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC6A12P48065 AL645933.1-201ENST00000440087 609 ntBASIC14.16□□□□□ -0.14
SLC6A12P48065 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.16□□□□□ -0.14
SLC6A12P48065 ACA64.2-201ENST00000459014 129 ntBASIC14.16□□□□□ -0.14
SLC6A12P48065 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC6A12P48065 AC100850.1-201ENST00000506768 649 ntBASIC14.16□□□□□ -0.14
SLC6A12P48065 AC104989.1-201ENST00000519711 778 ntBASIC14.16□□□□□ -0.14
SLC6A12P48065 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC6A12P48065 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.16□□□□□ -0.14
SLC6A12P48065 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.16□□□□□ -0.14
SLC6A12P48065 AC009955.4-201ENST00000597192 544 ntBASIC14.16□□□□□ -0.14
SLC6A12P48065 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SLC6A12P48065 MIR6775-201ENST00000617557 69 ntBASIC14.16□□□□□ -0.14
SLC6A12P48065 AL035252.4-201ENST00000624174 288 ntBASIC14.16□□□□□ -0.14
SLC6A12P48065 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.16□□□□□ -0.14
SLC6A12P48065 FLJ16779-201ENST00000612722 7638 ntBASIC14.16□□□□□ -0.14
SLC6A12P48065 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SLC6A12P48065 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC6A12P48065 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.16□□□□□ -0.14
SLC6A12P48065 KRT8P24-201ENST00000560290 1559 ntBASIC14.16□□□□□ -0.14
SLC6A12P48065 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC6A12P48065 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC6A12P48065 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SLC6A12P48065 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC6A12P48065 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC6A12P48065 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.15□□□□□ -0.14
SLC6A12P48065 AC063926.2-201ENST00000623766 1308 ntBASIC14.15□□□□□ -0.14
SLC6A12P48065 TMBIM7P-202ENST00000641474 1516 ntBASIC14.15□□□□□ -0.14
SLC6A12P48065 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC6A12P48065 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SLC6A12P48065 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SLC6A12P48065 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC6A12P48065 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SLC6A12P48065 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
SLC6A12P48065 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC6A12P48065 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC6A12P48065 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 AL157407.1-201ENST00000435784 904 ntBASIC14.15□□□□□ -0.14
SLC6A12P48065 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.15□□□□□ -0.14
SLC6A12P48065 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.15□□□□□ -0.14
SLC6A12P48065 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.15□□□□□ -0.14
SLC6A12P48065 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC6A12P48065 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC6A12P48065 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
SLC6A12P48065 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SLC6A12P48065 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC6A12P48065 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC6A12P48065 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms