Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NR4A2P43354 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.51□□□□□ -0.25
NR4A2P43354 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.51□□□□□ -0.25
NR4A2P43354 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.51□□□□□ -0.25
NR4A2P43354 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.51□□□□□ -0.25
NR4A2P43354 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.51□□□□□ -0.25
NR4A2P43354 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.51□□□□□ -0.25
NR4A2P43354 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.51□□□□□ -0.25
NR4A2P43354 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
NR4A2P43354 SLC7A15P-201ENST00000424028 1363 ntBASIC13.51□□□□□ -0.25
NR4A2P43354 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NR4A2P43354 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
NR4A2P43354 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
NR4A2P43354 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
NR4A2P43354 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.51□□□□□ -0.25
NR4A2P43354 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
NR4A2P43354 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NR4A2P43354 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.51□□□□□ -0.25
NR4A2P43354 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.51□□□□□ -0.25
NR4A2P43354 GPR53P-205ENST00000457298 1084 ntBASIC13.51□□□□□ -0.25
NR4A2P43354 GIMAP3P-201ENST00000495150 836 ntBASIC13.51□□□□□ -0.25
NR4A2P43354 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
NR4A2P43354 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.51□□□□□ -0.25
NR4A2P43354 AC055876.2-201ENST00000531834 546 ntBASIC13.51□□□□□ -0.25
NR4A2P43354 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.51□□□□□ -0.25
NR4A2P43354 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
NR4A2P43354 SRD5A3P1-201ENST00000603021 949 ntBASIC13.51□□□□□ -0.25
NR4A2P43354 AC008494.3-201ENST00000606615 944 ntBASIC13.51□□□□□ -0.25
NR4A2P43354 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.51□□□□□ -0.25
NR4A2P43354 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.51□□□□□ -0.25
NR4A2P43354 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 AC114271.1-201ENST00000612689 2813 ntBASIC13.51□□□□□ -0.25
NR4A2P43354 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.51□□□□□ -0.25
NR4A2P43354 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 DNM1P41-201ENST00000623634 3350 ntBASIC13.51□□□□□ -0.25
NR4A2P43354 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NR4A2P43354 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A2P43354 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A2P43354 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NR4A2P43354 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A2P43354 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
NR4A2P43354 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A2P43354 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A2P43354 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A2P43354 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A2P43354 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NR4A2P43354 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
NR4A2P43354 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A2P43354 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A2P43354 AC004987.2-201ENST00000395959 1148 ntBASIC13.5□□□□□ -0.25
NR4A2P43354 ATP5G2P4-201ENST00000442175 420 ntBASIC13.5□□□□□ -0.25
NR4A2P43354 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A2P43354 INE1-201ENST00000456273 945 ntBASIC13.5□□□□□ -0.25
NR4A2P43354 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A2P43354 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A2P43354 TPRX2P-201ENST00000535362 881 ntBASIC13.5□□□□□ -0.25
NR4A2P43354 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A2P43354 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A2P43354 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.5□□□□□ -0.25
NR4A2P43354 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.5□□□□□ -0.25
NR4A2P43354 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.5□□□□□ -0.25
NR4A2P43354 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.5□□□□□ -0.25
NR4A2P43354 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.5□□□□□ -0.25
NR4A2P43354 CHCHD2P3-201ENST00000603038 451 ntBASIC13.5□□□□□ -0.25
NR4A2P43354 AL450472.2-201ENST00000603663 1156 ntBASIC13.5□□□□□ -0.25
NR4A2P43354 AC004790.1-201ENST00000612686 536 ntBASIC13.5□□□□□ -0.25
NR4A2P43354 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.5□□□□□ -0.25
NR4A2P43354 AC007431.3-201ENST00000623221 587 ntBASIC13.5□□□□□ -0.25
NR4A2P43354 AC004461.2-201ENST00000629517 803 ntBASIC13.5□□□□□ -0.25
NR4A2P43354 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.5□□□□□ -0.25
NR4A2P43354 AL109936.8-201ENST00000641772 604 ntBASIC13.5□□□□□ -0.25
NR4A2P43354 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A2P43354 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
NR4A2P43354 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NR4A2P43354 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms