Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLC1A3P43003 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLC1A3P43003 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SLC1A3P43003 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SLC1A3P43003 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.6□□□□□ -0.23
SLC1A3P43003 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.6□□□□□ -0.23
SLC1A3P43003 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.6□□□□□ -0.23
SLC1A3P43003 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
SLC1A3P43003 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SLC1A3P43003 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.6□□□□□ -0.23
SLC1A3P43003 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.6□□□□□ -0.23
SLC1A3P43003 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.6□□□□□ -0.23
SLC1A3P43003 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SLC1A3P43003 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
SLC1A3P43003 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.6□□□□□ -0.23
SLC1A3P43003 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.6□□□□□ -0.23
SLC1A3P43003 POM121L8P-201ENST00000417732 1281 ntBASIC13.6□□□□□ -0.23
SLC1A3P43003 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.6□□□□□ -0.23
SLC1A3P43003 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.6□□□□□ -0.23
SLC1A3P43003 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SLC1A3P43003 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.6□□□□□ -0.23
SLC1A3P43003 POM121L9P-203ENST00000441984 1285 ntBASIC13.6□□□□□ -0.23
SLC1A3P43003 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SLC1A3P43003 MESTP3-201ENST00000503460 968 ntBASIC13.6□□□□□ -0.23
SLC1A3P43003 AC106760.1-201ENST00000508690 800 ntBASIC13.6□□□□□ -0.23
SLC1A3P43003 AC022447.6-201ENST00000515522 438 ntBASIC13.6□□□□□ -0.23
SLC1A3P43003 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SLC1A3P43003 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.6□□□□□ -0.23
SLC1A3P43003 SLC25A47P1-201ENST00000531577 414 ntBASIC13.6□□□□□ -0.23
SLC1A3P43003 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SLC1A3P43003 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.6□□□□□ -0.23
SLC1A3P43003 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
SLC1A3P43003 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.6□□□□□ -0.23
SLC1A3P43003 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.6□□□□□ -0.23
SLC1A3P43003 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.6□□□□□ -0.23
SLC1A3P43003 AC239800.4-201ENST00000603712 296 ntBASIC13.6□□□□□ -0.23
SLC1A3P43003 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.6□□□□□ -0.23
SLC1A3P43003 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.6□□□□□ -0.23
SLC1A3P43003 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.6□□□□□ -0.23
SLC1A3P43003 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.6□□□□□ -0.23
SLC1A3P43003 AC089987.1-201ENST00000551654 2209 ntBASIC13.6□□□□□ -0.23
SLC1A3P43003 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.6□□□□□ -0.23
SLC1A3P43003 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.6□□□□□ -0.23
SLC1A3P43003 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SLC1A3P43003 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.6□□□□□ -0.23
SLC1A3P43003 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.6□□□□□ -0.23
SLC1A3P43003 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A3P43003 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SLC1A3P43003 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SLC1A3P43003 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SLC1A3P43003 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A3P43003 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A3P43003 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A3P43003 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SLC1A3P43003 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SLC1A3P43003 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SLC1A3P43003 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A3P43003 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
SLC1A3P43003 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A3P43003 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A3P43003 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SLC1A3P43003 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A3P43003 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
SLC1A3P43003 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.59□□□□□ -0.23
SLC1A3P43003 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SLC1A3P43003 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A3P43003 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.59□□□□□ -0.23
SLC1A3P43003 PTENP1-202ENST00000532280 3996 ntBASIC13.59□□□□□ -0.23
SLC1A3P43003 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A3P43003 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A3P43003 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A3P43003 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A3P43003 TPM3P8-201ENST00000330554 643 ntBASIC13.59□□□□□ -0.23
SLC1A3P43003 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms