Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC15.94■□□□□ 0.14
HTTP42858 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HTTP42858 ISL1-203ENST00000511384 981 ntTSL 5 BASIC15.94■□□□□ 0.14
HTTP42858 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC15.94■□□□□ 0.14
HTTP42858 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC15.94■□□□□ 0.14
HTTP42858 RN7SL478P-201ENST00000584358 298 ntBASIC15.94■□□□□ 0.14
HTTP42858 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.94■□□□□ 0.14
HTTP42858 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.94■□□□□ 0.14
HTTP42858 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
HTTP42858 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC15.94■□□□□ 0.14
HTTP42858 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HTTP42858 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HTTP42858 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HTTP42858 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HTTP42858 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HTTP42858 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HTTP42858 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HTTP42858 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC15.94■□□□□ 0.14
HTTP42858 TYMSP2-201ENST00000589501 424 ntBASIC15.94■□□□□ 0.14
HTTP42858 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HTTP42858 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HTTP42858 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HTTP42858 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HTTP42858 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.94■□□□□ 0.14
HTTP42858 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HTTP42858 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HTTP42858 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
HTTP42858 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HTTP42858 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HTTP42858 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC15.94■□□□□ 0.14
HTTP42858 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HTTP42858 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC15.94■□□□□ 0.14
HTTP42858 EEF1DP2-201ENST00000433698 843 ntBASIC15.94■□□□□ 0.14
HTTP42858 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.94■□□□□ 0.14
HTTP42858 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HTTP42858 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC15.94■□□□□ 0.14
HTTP42858 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC15.94■□□□□ 0.14
HTTP42858 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC15.94■□□□□ 0.14
HTTP42858 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC15.94■□□□□ 0.14
HTTP42858 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HTTP42858 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.94■□□□□ 0.14
HTTP42858 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HTTP42858 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.94■□□□□ 0.14
HTTP42858 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HTTP42858 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HTTP42858 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
HTTP42858 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HTTP42858 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
HTTP42858 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
HTTP42858 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC15.93■□□□□ 0.14
HTTP42858 MIR611-201ENST00000384869 67 ntBASIC15.93■□□□□ 0.14
HTTP42858 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC15.93■□□□□ 0.14
HTTP42858 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.93■□□□□ 0.14
HTTP42858 MARK2P17-201ENST00000498560 841 ntBASIC15.93■□□□□ 0.14
HTTP42858 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HTTP42858 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC15.93■□□□□ 0.14
HTTP42858 ABCC6P1-203ENST00000565566 1170 ntBASIC15.93■□□□□ 0.14
HTTP42858 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC15.93■□□□□ 0.14
HTTP42858 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC15.93■□□□□ 0.14
HTTP42858 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
HTTP42858 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HTTP42858 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.93■□□□□ 0.14
HTTP42858 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HTTP42858 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HTTP42858 RPL13AP3-202ENST00000494676 1473 ntBASIC15.93■□□□□ 0.14
HTTP42858 GUCY2EP-203ENST00000531117 1918 ntBASIC15.93■□□□□ 0.14
HTTP42858 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HTTP42858 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.93■□□□□ 0.14
HTTP42858 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.93■□□□□ 0.14
HTTP42858 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HTTP42858 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HTTP42858 AIG1-203ENST00000367596 559 ntTSL 2 BASIC15.93■□□□□ 0.14
HTTP42858 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC15.93■□□□□ 0.14
HTTP42858 BX679664.3-201ENST00000414070 555 ntBASIC15.93■□□□□ 0.14
HTTP42858 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC15.93■□□□□ 0.14
HTTP42858 GRPEL2P1-201ENST00000453145 339 ntBASIC15.93■□□□□ 0.14
HTTP42858 AC113935.1-201ENST00000471722 555 ntBASIC15.93■□□□□ 0.14
HTTP42858 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HTTP42858 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.93■□□□□ 0.14
HTTP42858 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HTTP42858 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC15.93■□□□□ 0.14
HTTP42858 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
HTTP42858 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.92■□□□□ 0.14
HTTP42858 AC092903.1-201ENST00000466506 262 ntBASIC15.92■□□□□ 0.14
HTTP42858 SNRPD2P2-201ENST00000473818 333 ntBASIC15.92■□□□□ 0.14
HTTP42858 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HTTP42858 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HTTP42858 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HTTP42858 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HTTP42858 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
HTTP42858 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HTTP42858 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HTTP42858 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HTTP42858 KRT18P33-201ENST00000398525 1043 ntBASIC15.92■□□□□ 0.14
HTTP42858 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HTTP42858 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC15.92■□□□□ 0.14
HTTP42858 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HTTP42858 RNASEH2CP1-201ENST00000454281 502 ntBASIC15.92■□□□□ 0.14
HTTP42858 DERL2-206ENST00000572834 589 ntTSL 3 BASIC15.92■□□□□ 0.14
HTTP42858 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms