Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.6□□□□□ -0.07
GABRB3P28472 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.6□□□□□ -0.07
GABRB3P28472 BTNL10-201ENST00000595971 695 ntBASIC14.6□□□□□ -0.07
GABRB3P28472 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.6□□□□□ -0.07
GABRB3P28472 AC073413.1-201ENST00000603927 732 ntBASIC14.6□□□□□ -0.07
GABRB3P28472 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 IGHV3-72-202ENST00000621503 303 ntBASIC14.6□□□□□ -0.07
GABRB3P28472 AC002472.3-201ENST00000640124 621 ntBASIC14.6□□□□□ -0.07
GABRB3P28472 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
GABRB3P28472 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 COL6A4P2-202ENST00000504443 2753 ntBASIC14.6□□□□□ -0.07
GABRB3P28472 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.6□□□□□ -0.07
GABRB3P28472 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.6□□□□□ -0.07
GABRB3P28472 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GABRB3P28472 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.59□□□□□ -0.07
GABRB3P28472 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
GABRB3P28472 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
GABRB3P28472 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.59□□□□□ -0.07
GABRB3P28472 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.59□□□□□ -0.07
GABRB3P28472 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.59□□□□□ -0.07
GABRB3P28472 AL512384.1-201ENST00000406683 331 ntBASIC14.59□□□□□ -0.07
GABRB3P28472 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
GABRB3P28472 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.59□□□□□ -0.07
GABRB3P28472 CD8B2-202ENST00000417670 633 ntBASIC14.59□□□□□ -0.07
GABRB3P28472 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.59□□□□□ -0.07
GABRB3P28472 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.59□□□□□ -0.07
GABRB3P28472 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.59□□□□□ -0.07
GABRB3P28472 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.59□□□□□ -0.07
GABRB3P28472 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.59□□□□□ -0.07
GABRB3P28472 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.59□□□□□ -0.07
GABRB3P28472 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
GABRB3P28472 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
GABRB3P28472 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.59□□□□□ -0.07
GABRB3P28472 AL358472.3-201ENST00000608147 415 ntBASIC14.59□□□□□ -0.07
GABRB3P28472 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.59□□□□□ -0.07
GABRB3P28472 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
GABRB3P28472 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.59□□□□□ -0.07
GABRB3P28472 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.59□□□□□ -0.07
GABRB3P28472 AC006453.4-201ENST00000636949 1252 ntBASIC14.59□□□□□ -0.07
GABRB3P28472 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
GABRB3P28472 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.59□□□□□ -0.07
GABRB3P28472 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.59□□□□□ -0.07
GABRB3P28472 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.59□□□□□ -0.07
GABRB3P28472 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.59□□□□□ -0.07
GABRB3P28472 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
GABRB3P28472 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.59□□□□□ -0.07
GABRB3P28472 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABRB3P28472 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.58□□□□□ -0.07
GABRB3P28472 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.58□□□□□ -0.07
GABRB3P28472 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
GABRB3P28472 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GABRB3P28472 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
GABRB3P28472 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
GABRB3P28472 AC130686.1-201ENST00000622936 2466 ntBASIC14.58□□□□□ -0.07
GABRB3P28472 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GABRB3P28472 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
GABRB3P28472 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
GABRB3P28472 AL157996.1-201ENST00000624684 2299 ntBASIC14.58□□□□□ -0.08
GABRB3P28472 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms