Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.45□□□□□ -0.42
COL8A2P25067 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.45□□□□□ -0.42
COL8A2P25067 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
COL8A2P25067 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.45□□□□□ -0.42
COL8A2P25067 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.45□□□□□ -0.42
COL8A2P25067 PUDPP3-201ENST00000445368 636 ntBASIC12.45□□□□□ -0.42
COL8A2P25067 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.45□□□□□ -0.42
COL8A2P25067 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.45□□□□□ -0.42
COL8A2P25067 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.45□□□□□ -0.42
COL8A2P25067 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.45□□□□□ -0.42
COL8A2P25067 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.45□□□□□ -0.42
COL8A2P25067 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.45□□□□□ -0.42
COL8A2P25067 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.45□□□□□ -0.42
COL8A2P25067 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.45□□□□□ -0.42
COL8A2P25067 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
COL8A2P25067 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.45□□□□□ -0.42
COL8A2P25067 AC068587.8-201ENST00000641239 219 ntBASIC12.45□□□□□ -0.42
COL8A2P25067 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
COL8A2P25067 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
COL8A2P25067 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.45□□□□□ -0.42
COL8A2P25067 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
COL8A2P25067 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.45□□□□□ -0.42
COL8A2P25067 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
COL8A2P25067 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.45□□□□□ -0.42
COL8A2P25067 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
COL8A2P25067 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.45□□□□□ -0.42
COL8A2P25067 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.45□□□□□ -0.42
COL8A2P25067 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.45□□□□□ -0.42
COL8A2P25067 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
COL8A2P25067 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.45□□□□□ -0.42
COL8A2P25067 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.45□□□□□ -0.42
COL8A2P25067 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.45□□□□□ -0.42
COL8A2P25067 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
COL8A2P25067 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
COL8A2P25067 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COL8A2P25067 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.44□□□□□ -0.42
COL8A2P25067 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COL8A2P25067 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COL8A2P25067 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
COL8A2P25067 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COL8A2P25067 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COL8A2P25067 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COL8A2P25067 AL008718.2-201ENST00000609206 1313 ntBASIC12.44□□□□□ -0.42
COL8A2P25067 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.44□□□□□ -0.42
COL8A2P25067 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
COL8A2P25067 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
COL8A2P25067 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
COL8A2P25067 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.44□□□□□ -0.42
COL8A2P25067 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
COL8A2P25067 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.44□□□□□ -0.42
COL8A2P25067 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
COL8A2P25067 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COL8A2P25067 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.44□□□□□ -0.42
COL8A2P25067 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.44□□□□□ -0.42
COL8A2P25067 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.44□□□□□ -0.42
COL8A2P25067 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.44□□□□□ -0.42
COL8A2P25067 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COL8A2P25067 FAM58BP-201ENST00000439056 645 ntBASIC12.44□□□□□ -0.42
COL8A2P25067 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COL8A2P25067 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.44□□□□□ -0.42
COL8A2P25067 AC106794.1-201ENST00000506935 792 ntBASIC12.44□□□□□ -0.42
COL8A2P25067 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.44□□□□□ -0.42
COL8A2P25067 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.44□□□□□ -0.42
COL8A2P25067 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.44□□□□□ -0.42
COL8A2P25067 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.44□□□□□ -0.42
COL8A2P25067 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC12.44□□□□□ -0.42
COL8A2P25067 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COL8A2P25067 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.44□□□□□ -0.42
COL8A2P25067 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
COL8A2P25067 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
COL8A2P25067 AC090164.2-201ENST00000611487 516 ntBASIC12.44□□□□□ -0.42
COL8A2P25067 AL021578.1-201ENST00000613646 709 ntBASIC12.44□□□□□ -0.42
COL8A2P25067 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.44□□□□□ -0.42
COL8A2P25067 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COL8A2P25067 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COL8A2P25067 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
COL8A2P25067 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
COL8A2P25067 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COL8A2P25067 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COL8A2P25067 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COL8A2P25067 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms