Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFX1P22670 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
RFX1P22670 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFX1P22670 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFX1P22670 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFX1P22670 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RFX1P22670 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RFX1P22670 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFX1P22670 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFX1P22670 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.07■□□□□ 0.16
RFX1P22670 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.07■□□□□ 0.16
RFX1P22670 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.07■□□□□ 0.16
RFX1P22670 AC005077.2-201ENST00000449786 690 ntBASIC16.07■□□□□ 0.16
RFX1P22670 UPF3AP2-201ENST00000457924 1132 ntBASIC16.07■□□□□ 0.16
RFX1P22670 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.07■□□□□ 0.16
RFX1P22670 GCOM2-201ENST00000509133 1104 ntBASIC16.07■□□□□ 0.16
RFX1P22670 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFX1P22670 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
RFX1P22670 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.07■□□□□ 0.16
RFX1P22670 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.07■□□□□ 0.16
RFX1P22670 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFX1P22670 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.07■□□□□ 0.16
RFX1P22670 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.07■□□□□ 0.16
RFX1P22670 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.07■□□□□ 0.16
RFX1P22670 MIR6074-201ENST00000612054 107 ntBASIC16.07■□□□□ 0.16
RFX1P22670 AC015967.2-201ENST00000624092 234 ntBASIC16.07■□□□□ 0.16
RFX1P22670 AC006435.4-201ENST00000625037 234 ntBASIC16.07■□□□□ 0.16
RFX1P22670 AL356737.1-201ENST00000634391 234 ntBASIC16.07■□□□□ 0.16
RFX1P22670 AL136172.1-201ENST00000598590 1394 ntBASIC16.07■□□□□ 0.16
RFX1P22670 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFX1P22670 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.07■□□□□ 0.16
RFX1P22670 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFX1P22670 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFX1P22670 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFX1P22670 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFX1P22670 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFX1P22670 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RFX1P22670 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RFX1P22670 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFX1P22670 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
RFX1P22670 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RFX1P22670 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFX1P22670 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RFX1P22670 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
RFX1P22670 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.06■□□□□ 0.16
RFX1P22670 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.06■□□□□ 0.16
RFX1P22670 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RFX1P22670 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFX1P22670 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.06■□□□□ 0.16
RFX1P22670 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.06■□□□□ 0.16
RFX1P22670 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFX1P22670 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.06■□□□□ 0.16
RFX1P22670 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RFX1P22670 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFX1P22670 AC138028.6-201ENST00000616106 1482 ntBASIC16.06■□□□□ 0.16
RFX1P22670 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFX1P22670 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.06■□□□□ 0.16
RFX1P22670 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RFX1P22670 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFX1P22670 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFX1P22670 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFX1P22670 FNTAP2-201ENST00000430308 634 ntBASIC16.06■□□□□ 0.16
RFX1P22670 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFX1P22670 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.06■□□□□ 0.16
RFX1P22670 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.06■□□□□ 0.16
RFX1P22670 MESTP3-201ENST00000503460 968 ntBASIC16.06■□□□□ 0.16
RFX1P22670 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RFX1P22670 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.06■□□□□ 0.16
RFX1P22670 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.06■□□□□ 0.16
RFX1P22670 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RFX1P22670 AC104982.3-201ENST00000581995 514 ntBASIC16.06■□□□□ 0.16
RFX1P22670 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFX1P22670 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFX1P22670 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFX1P22670 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFX1P22670 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFX1P22670 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.06■□□□□ 0.16
RFX1P22670 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFX1P22670 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFX1P22670 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFX1P22670 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFX1P22670 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFX1P22670 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.05■□□□□ 0.16
RFX1P22670 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RFX1P22670 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFX1P22670 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC16.05■□□□□ 0.16
RFX1P22670 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFX1P22670 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RFX1P22670 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFX1P22670 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.05■□□□□ 0.16
RFX1P22670 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RFX1P22670 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RFX1P22670 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
RFX1P22670 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RFX1P22670 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RFX1P22670 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFX1P22670 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.05■□□□□ 0.16
RFX1P22670 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFX1P22670 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFX1P22670 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms