Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCLP19338 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NCLP19338 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NCLP19338 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCLP19338 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NCLP19338 AC118758.2-201ENST00000614242 2813 ntBASIC17.68■□□□□ 0.42
NCLP19338 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NCLP19338 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NCLP19338 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
NCLP19338 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCLP19338 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCLP19338 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.68■□□□□ 0.42
NCLP19338 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
NCLP19338 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.68■□□□□ 0.42
NCLP19338 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.68■□□□□ 0.42
NCLP19338 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.68■□□□□ 0.42
NCLP19338 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.68■□□□□ 0.42
NCLP19338 RPL13P2-201ENST00000440687 659 ntBASIC17.68■□□□□ 0.42
NCLP19338 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NCLP19338 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
NCLP19338 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.68■□□□□ 0.42
NCLP19338 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCLP19338 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.68■□□□□ 0.42
NCLP19338 AC009407.1-201ENST00000568958 598 ntBASIC17.68■□□□□ 0.42
NCLP19338 AL645728.2-202ENST00000641679 227 ntBASIC17.68■□□□□ 0.42
NCLP19338 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NCLP19338 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCLP19338 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCLP19338 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
NCLP19338 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NCLP19338 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCLP19338 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NCLP19338 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NCLP19338 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.67■□□□□ 0.42
NCLP19338 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC17.67■□□□□ 0.42
NCLP19338 LILRP1-201ENST00000444199 1370 ntBASIC17.67■□□□□ 0.42
NCLP19338 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.67■□□□□ 0.42
NCLP19338 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCLP19338 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NCLP19338 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NCLP19338 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NCLP19338 REXO1L1P-201ENST00000379010 6598 ntBASIC17.67■□□□□ 0.42
NCLP19338 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NCLP19338 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCLP19338 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCLP19338 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.67■□□□□ 0.42
NCLP19338 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.67■□□□□ 0.42
NCLP19338 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.67■□□□□ 0.42
NCLP19338 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCLP19338 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.67■□□□□ 0.42
NCLP19338 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NCLP19338 AC239800.4-201ENST00000603712 296 ntBASIC17.67■□□□□ 0.42
NCLP19338 AC105233.6-201ENST00000642093 218 ntBASIC17.67■□□□□ 0.42
NCLP19338 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
NCLP19338 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NCLP19338 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCLP19338 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NCLP19338 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCLP19338 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NCLP19338 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NCLP19338 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCLP19338 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC17.67■□□□□ 0.42
NCLP19338 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NCLP19338 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NCLP19338 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NCLP19338 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.67■□□□□ 0.42
NCLP19338 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCLP19338 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NCLP19338 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NCLP19338 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NCLP19338 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NCLP19338 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NCLP19338 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NCLP19338 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCLP19338 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.66■□□□□ 0.42
NCLP19338 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.66■□□□□ 0.42
NCLP19338 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NCLP19338 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NCLP19338 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NCLP19338 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCLP19338 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NCLP19338 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCLP19338 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NCLP19338 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCLP19338 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCLP19338 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCLP19338 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC17.66■□□□□ 0.42
NCLP19338 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NCLP19338 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.66■□□□□ 0.42
NCLP19338 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.66■□□□□ 0.42
NCLP19338 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.66■□□□□ 0.42
NCLP19338 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.66■□□□□ 0.42
NCLP19338 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.66■□□□□ 0.42
NCLP19338 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.66■□□□□ 0.42
NCLP19338 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.66■□□□□ 0.42
NCLP19338 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.66■□□□□ 0.42
NCLP19338 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.66■□□□□ 0.42
NCLP19338 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCLP19338 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCLP19338 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms