Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.91□□□□□ -0.02
VCLP18206 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 AL157414.3-201ENST00000624276 1954 ntBASIC14.91□□□□□ -0.02
VCLP18206 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VCLP18206 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
VCLP18206 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VCLP18206 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.9□□□□□ -0.02
VCLP18206 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.9□□□□□ -0.02
VCLP18206 AL138709.1-201ENST00000614840 1693 ntBASIC14.9□□□□□ -0.02
VCLP18206 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VCLP18206 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VCLP18206 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.9□□□□□ -0.02
VCLP18206 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VCLP18206 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.9□□□□□ -0.02
VCLP18206 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VCLP18206 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.9□□□□□ -0.02
VCLP18206 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.9□□□□□ -0.02
VCLP18206 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.9□□□□□ -0.02
VCLP18206 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VCLP18206 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.9□□□□□ -0.02
VCLP18206 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
VCLP18206 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
VCLP18206 AL359881.3-201ENST00000602640 1721 ntBASIC14.9□□□□□ -0.02
VCLP18206 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VCLP18206 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VCLP18206 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
VCLP18206 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.9□□□□□ -0.02
VCLP18206 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.9□□□□□ -0.02
VCLP18206 HLA-K-203ENST00000430151 1046 ntBASIC14.9□□□□□ -0.02
VCLP18206 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.9□□□□□ -0.02
VCLP18206 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VCLP18206 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.9□□□□□ -0.02
VCLP18206 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.9□□□□□ -0.02
VCLP18206 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.9□□□□□ -0.02
VCLP18206 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VCLP18206 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.9□□□□□ -0.02
VCLP18206 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.9□□□□□ -0.02
VCLP18206 COX11-210ENST00000639671 696 ntBASIC14.9□□□□□ -0.02
VCLP18206 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.9□□□□□ -0.02
VCLP18206 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
VCLP18206 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.9□□□□□ -0.02
VCLP18206 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VCLP18206 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.9□□□□□ -0.02
VCLP18206 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VCLP18206 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
VCLP18206 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.9□□□□□ -0.02
VCLP18206 AC055811.4-201ENST00000624039 1754 ntBASIC14.9□□□□□ -0.02
VCLP18206 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
VCLP18206 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
VCLP18206 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VCLP18206 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VCLP18206 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VCLP18206 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
VCLP18206 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.9□□□□□ -0.02
VCLP18206 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VCLP18206 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VCLP18206 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VCLP18206 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
VCLP18206 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
VCLP18206 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
VCLP18206 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.89□□□□□ -0.03
VCLP18206 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
VCLP18206 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.89□□□□□ -0.03
VCLP18206 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.89□□□□□ -0.03
VCLP18206 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 AC245100.3-201ENST00000441281 285 ntBASIC14.89□□□□□ -0.03
VCLP18206 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
VCLP18206 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.89□□□□□ -0.03
VCLP18206 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.89□□□□□ -0.03
VCLP18206 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.89□□□□□ -0.03
VCLP18206 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.89□□□□□ -0.03
VCLP18206 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.89□□□□□ -0.03
VCLP18206 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.89□□□□□ -0.03
VCLP18206 AL008721.1-201ENST00000609964 604 ntBASIC14.89□□□□□ -0.03
VCLP18206 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
VCLP18206 ENPP7P14-201ENST00000621765 1040 ntBASIC14.89□□□□□ -0.03
VCLP18206 AC138951.2-201ENST00000623455 1161 ntBASIC14.89□□□□□ -0.03
VCLP18206 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.89□□□□□ -0.03
VCLP18206 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VCLP18206 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms