Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.17■□□□□ 0.18
SMPD1P17405 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.17■□□□□ 0.18
SMPD1P17405 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.17■□□□□ 0.18
SMPD1P17405 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMPD1P17405 AC138701.2-201ENST00000553634 226 ntBASIC16.17■□□□□ 0.18
SMPD1P17405 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.17■□□□□ 0.18
SMPD1P17405 HERC2P11-201ENST00000562845 725 ntBASIC16.17■□□□□ 0.18
SMPD1P17405 AC100756.2-201ENST00000569537 736 ntBASIC16.17■□□□□ 0.18
SMPD1P17405 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.17■□□□□ 0.18
SMPD1P17405 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SMPD1P17405 AC127024.7-201ENST00000625101 200 ntBASIC16.17■□□□□ 0.18
SMPD1P17405 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMPD1P17405 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.17■□□□□ 0.18
SMPD1P17405 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
SMPD1P17405 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.17■□□□□ 0.18
SMPD1P17405 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SMPD1P17405 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMPD1P17405 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMPD1P17405 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMPD1P17405 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.17■□□□□ 0.18
SMPD1P17405 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.17■□□□□ 0.18
SMPD1P17405 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SMPD1P17405 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMPD1P17405 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMPD1P17405 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMPD1P17405 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.17■□□□□ 0.18
SMPD1P17405 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.16■□□□□ 0.18
SMPD1P17405 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SMPD1P17405 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMPD1P17405 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMPD1P17405 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMPD1P17405 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMPD1P17405 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SMPD1P17405 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMPD1P17405 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SMPD1P17405 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.16■□□□□ 0.18
SMPD1P17405 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMPD1P17405 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SMPD1P17405 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMPD1P17405 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMPD1P17405 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.16■□□□□ 0.18
SMPD1P17405 AC004837.1-201ENST00000446267 564 ntBASIC16.16■□□□□ 0.18
SMPD1P17405 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.16■□□□□ 0.18
SMPD1P17405 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.16■□□□□ 0.18
SMPD1P17405 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.16■□□□□ 0.18
SMPD1P17405 RNA5SP417-201ENST00000516459 108 ntBASIC16.16■□□□□ 0.18
SMPD1P17405 AC140658.4-201ENST00000561990 352 ntBASIC16.16■□□□□ 0.18
SMPD1P17405 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.16■□□□□ 0.18
SMPD1P17405 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.16■□□□□ 0.18
SMPD1P17405 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.16■□□□□ 0.18
SMPD1P17405 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.16■□□□□ 0.18
SMPD1P17405 AC009145.4-201ENST00000625119 1294 ntBASIC16.16■□□□□ 0.18
SMPD1P17405 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMPD1P17405 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMPD1P17405 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMPD1P17405 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMPD1P17405 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMPD1P17405 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMPD1P17405 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMPD1P17405 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.16■□□□□ 0.18
SMPD1P17405 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.16■□□□□ 0.18
SMPD1P17405 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SMPD1P17405 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SMPD1P17405 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMPD1P17405 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMPD1P17405 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SMPD1P17405 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SMPD1P17405 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMPD1P17405 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMPD1P17405 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SMPD1P17405 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.15■□□□□ 0.18
SMPD1P17405 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMPD1P17405 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
SMPD1P17405 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMPD1P17405 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMPD1P17405 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMPD1P17405 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMPD1P17405 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SMPD1P17405 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMPD1P17405 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.15■□□□□ 0.18
SMPD1P17405 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.15■□□□□ 0.18
SMPD1P17405 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMPD1P17405 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMPD1P17405 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMPD1P17405 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.15■□□□□ 0.18
SMPD1P17405 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMPD1P17405 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMPD1P17405 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMPD1P17405 AC092638.2-201ENST00000441105 947 ntBASIC16.15■□□□□ 0.18
SMPD1P17405 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.15■□□□□ 0.18
SMPD1P17405 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.15■□□□□ 0.18
SMPD1P17405 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.15■□□□□ 0.18
SMPD1P17405 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.15■□□□□ 0.18
SMPD1P17405 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.15■□□□□ 0.18
SMPD1P17405 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.15■□□□□ 0.18
SMPD1P17405 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.15■□□□□ 0.18
SMPD1P17405 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.15■□□□□ 0.18
SMPD1P17405 LINC01815-202ENST00000641468 1409 ntBASIC16.15■□□□□ 0.18
SMPD1P17405 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMPD1P17405 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms