Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PEPDP12955 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PEPDP12955 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PEPDP12955 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.73□□□□□ -0.21
PEPDP12955 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PEPDP12955 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PEPDP12955 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PEPDP12955 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PEPDP12955 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PEPDP12955 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.73□□□□□ -0.21
PEPDP12955 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.73□□□□□ -0.21
PEPDP12955 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.73□□□□□ -0.21
PEPDP12955 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PEPDP12955 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PEPDP12955 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PEPDP12955 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.73□□□□□ -0.21
PEPDP12955 MIR1909-201ENST00000411312 80 ntBASIC13.73□□□□□ -0.21
PEPDP12955 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PEPDP12955 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.73□□□□□ -0.21
PEPDP12955 RPL7P3-201ENST00000441388 714 ntBASIC13.73□□□□□ -0.21
PEPDP12955 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PEPDP12955 CTBP2P5-201ENST00000454986 1264 ntBASIC13.73□□□□□ -0.21
PEPDP12955 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.73□□□□□ -0.21
PEPDP12955 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.73□□□□□ -0.21
PEPDP12955 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PEPDP12955 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.73□□□□□ -0.21
PEPDP12955 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.73□□□□□ -0.21
PEPDP12955 AC079316.1-201ENST00000548397 411 ntBASIC13.73□□□□□ -0.21
PEPDP12955 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.73□□□□□ -0.21
PEPDP12955 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.73□□□□□ -0.21
PEPDP12955 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.73□□□□□ -0.21
PEPDP12955 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.73□□□□□ -0.21
PEPDP12955 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
PEPDP12955 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PEPDP12955 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PEPDP12955 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.73□□□□□ -0.21
PEPDP12955 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PEPDP12955 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PEPDP12955 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PEPDP12955 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PEPDP12955 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PEPDP12955 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PEPDP12955 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PEPDP12955 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.73□□□□□ -0.21
PEPDP12955 AC097359.2-201ENST00000604992 2389 ntBASIC13.73□□□□□ -0.21
PEPDP12955 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PEPDP12955 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PEPDP12955 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PEPDP12955 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PEPDP12955 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PEPDP12955 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.73□□□□□ -0.21
PEPDP12955 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.73□□□□□ -0.21
PEPDP12955 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.72□□□□□ -0.21
PEPDP12955 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
PEPDP12955 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
PEPDP12955 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.72□□□□□ -0.21
PEPDP12955 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 MIR658-201ENST00000385210 100 ntBASIC13.72□□□□□ -0.21
PEPDP12955 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
PEPDP12955 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.72□□□□□ -0.21
PEPDP12955 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.72□□□□□ -0.21
PEPDP12955 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.72□□□□□ -0.21
PEPDP12955 GNRHR2-203ENST00000581100 1187 ntBASIC13.72□□□□□ -0.21
PEPDP12955 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.72□□□□□ -0.21
PEPDP12955 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
PEPDP12955 AC055811.4-201ENST00000624039 1754 ntBASIC13.72□□□□□ -0.21
PEPDP12955 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.72□□□□□ -0.21
PEPDP12955 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
PEPDP12955 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.72□□□□□ -0.21
PEPDP12955 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
PEPDP12955 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.72□□□□□ -0.21
PEPDP12955 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
PEPDP12955 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.72□□□□□ -0.21
PEPDP12955 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
PEPDP12955 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
PEPDP12955 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PEPDP12955 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.71□□□□□ -0.21
PEPDP12955 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
PEPDP12955 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.71□□□□□ -0.21
PEPDP12955 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms