Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.85□□□□□ -0.03
RETP07949 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.85□□□□□ -0.03
RETP07949 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.85□□□□□ -0.03
RETP07949 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
RETP07949 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.85□□□□□ -0.03
RETP07949 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.85□□□□□ -0.03
RETP07949 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RETP07949 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.85□□□□□ -0.03
RETP07949 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RETP07949 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.85□□□□□ -0.03
RETP07949 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RETP07949 AC010234.1-201ENST00000494599 870 ntBASIC14.85□□□□□ -0.03
RETP07949 AC026803.1-201ENST00000569130 274 ntBASIC14.85□□□□□ -0.03
RETP07949 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RETP07949 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RETP07949 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.85□□□□□ -0.03
RETP07949 RNF146-211ENST00000609447 607 ntTSL 4 BASIC14.85□□□□□ -0.03
RETP07949 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RETP07949 AL645728.2-202ENST00000641679 227 ntBASIC14.85□□□□□ -0.03
RETP07949 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.85□□□□□ -0.03
RETP07949 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 GRK6P1-201ENST00000400595 1711 ntBASIC14.85□□□□□ -0.03
RETP07949 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.85□□□□□ -0.03
RETP07949 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RETP07949 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RETP07949 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RETP07949 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.84□□□□□ -0.03
RETP07949 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.84□□□□□ -0.03
RETP07949 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RETP07949 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.84□□□□□ -0.03
RETP07949 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.84□□□□□ -0.03
RETP07949 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC14.84□□□□□ -0.03
RETP07949 RPL8P2-201ENST00000430538 502 ntBASIC14.84□□□□□ -0.03
RETP07949 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC14.84□□□□□ -0.03
RETP07949 VDAC1P1-201ENST00000439229 848 ntBASIC14.84□□□□□ -0.03
RETP07949 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.84□□□□□ -0.03
RETP07949 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.84□□□□□ -0.03
RETP07949 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.84□□□□□ -0.03
RETP07949 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RETP07949 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.84□□□□□ -0.03
RETP07949 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RETP07949 AC007718.1-201ENST00000621078 280 ntBASIC14.84□□□□□ -0.03
RETP07949 AC127024.7-201ENST00000625101 200 ntBASIC14.84□□□□□ -0.03
RETP07949 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RETP07949 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RETP07949 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RETP07949 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.84□□□□□ -0.03
RETP07949 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RETP07949 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RETP07949 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RETP07949 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RETP07949 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.83□□□□□ -0.03
RETP07949 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.83□□□□□ -0.03
RETP07949 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RETP07949 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RETP07949 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RETP07949 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms