Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CD74P04233 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CD74P04233 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CD74P04233 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.41□□□□□ -0.42
CD74P04233 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CD74P04233 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.41□□□□□ -0.42
CD74P04233 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.41□□□□□ -0.42
CD74P04233 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CD74P04233 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CD74P04233 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.41□□□□□ -0.42
CD74P04233 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CD74P04233 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.41□□□□□ -0.42
CD74P04233 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.41□□□□□ -0.42
CD74P04233 AL139094.1-201ENST00000405549 1188 ntBASIC12.41□□□□□ -0.42
CD74P04233 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.41□□□□□ -0.42
CD74P04233 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.41□□□□□ -0.42
CD74P04233 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.41□□□□□ -0.42
CD74P04233 AC004461.1-201ENST00000412461 403 ntBASIC12.41□□□□□ -0.42
CD74P04233 AC136604.1-202ENST00000425471 771 ntBASIC12.41□□□□□ -0.42
CD74P04233 MARK2P9-201ENST00000430958 1727 ntBASIC12.41□□□□□ -0.42
CD74P04233 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.41□□□□□ -0.42
CD74P04233 ALG1L5P-201ENST00000482043 771 ntBASIC12.41□□□□□ -0.42
CD74P04233 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.41□□□□□ -0.42
CD74P04233 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.41□□□□□ -0.42
CD74P04233 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.41□□□□□ -0.42
CD74P04233 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.41□□□□□ -0.42
CD74P04233 AC092337.1-201ENST00000568699 1129 ntBASIC12.41□□□□□ -0.42
CD74P04233 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.41□□□□□ -0.42
CD74P04233 KRT18P8-201ENST00000581937 1246 ntBASIC12.41□□□□□ -0.42
CD74P04233 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.41□□□□□ -0.42
CD74P04233 AL391069.4-201ENST00000609583 481 ntBASIC12.41□□□□□ -0.42
CD74P04233 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.41□□□□□ -0.42
CD74P04233 AC009093.7-201ENST00000623853 1223 ntBASIC12.41□□□□□ -0.42
CD74P04233 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.41□□□□□ -0.42
CD74P04233 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.41□□□□□ -0.42
CD74P04233 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.41□□□□□ -0.42
CD74P04233 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.41□□□□□ -0.42
CD74P04233 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CD74P04233 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CD74P04233 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CD74P04233 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.41□□□□□ -0.42
CD74P04233 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
CD74P04233 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.41□□□□□ -0.42
CD74P04233 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD74P04233 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.4□□□□□ -0.42
CD74P04233 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.4□□□□□ -0.42
CD74P04233 MKRN5P-201ENST00000445263 1467 ntBASIC12.4□□□□□ -0.42
CD74P04233 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.4□□□□□ -0.42
CD74P04233 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CD74P04233 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CD74P04233 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CD74P04233 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CD74P04233 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
CD74P04233 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.4□□□□□ -0.42
CD74P04233 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.4□□□□□ -0.42
CD74P04233 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD74P04233 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.4□□□□□ -0.42
CD74P04233 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.4□□□□□ -0.42
CD74P04233 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CD74P04233 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms