Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.15□□□□□ -0.3
ALX3O95076 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.15□□□□□ -0.3
ALX3O95076 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
ALX3O95076 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.15□□□□□ -0.3
ALX3O95076 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
ALX3O95076 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 AL139400.1-201ENST00000366220 510 ntBASIC13.15□□□□□ -0.3
ALX3O95076 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.15□□□□□ -0.3
ALX3O95076 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.15□□□□□ -0.3
ALX3O95076 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ALX3O95076 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.15□□□□□ -0.3
ALX3O95076 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.15□□□□□ -0.3
ALX3O95076 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.15□□□□□ -0.3
ALX3O95076 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.15□□□□□ -0.3
ALX3O95076 AC140878.1-201ENST00000565277 250 ntBASIC13.15□□□□□ -0.3
ALX3O95076 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.15□□□□□ -0.3
ALX3O95076 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 AC027612.4-201ENST00000605371 583 ntBASIC13.15□□□□□ -0.3
ALX3O95076 MIR6752-201ENST00000618442 71 ntBASIC13.15□□□□□ -0.3
ALX3O95076 AP001002.2-201ENST00000625137 386 ntBASIC13.15□□□□□ -0.3
ALX3O95076 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.15□□□□□ -0.3
ALX3O95076 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.15□□□□□ -0.3
ALX3O95076 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ALX3O95076 BTBD7P1-201ENST00000447253 1453 ntBASIC13.15□□□□□ -0.3
ALX3O95076 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.15□□□□□ -0.3
ALX3O95076 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ALX3O95076 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
ALX3O95076 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.15□□□□□ -0.31
ALX3O95076 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
ALX3O95076 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.14□□□□□ -0.31
ALX3O95076 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13.14□□□□□ -0.31
ALX3O95076 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
ALX3O95076 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ALX3O95076 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.14□□□□□ -0.31
ALX3O95076 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.14□□□□□ -0.31
ALX3O95076 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.14□□□□□ -0.31
ALX3O95076 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
ALX3O95076 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
ALX3O95076 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
ALX3O95076 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.14□□□□□ -0.31
ALX3O95076 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ALX3O95076 AC114501.2-201ENST00000439631 535 ntBASIC13.14□□□□□ -0.31
ALX3O95076 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.14□□□□□ -0.31
ALX3O95076 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC13.14□□□□□ -0.31
ALX3O95076 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.14□□□□□ -0.31
ALX3O95076 TMEM198B-204ENST00000484016 896 ntBASIC13.14□□□□□ -0.31
ALX3O95076 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.14□□□□□ -0.31
ALX3O95076 AC069120.2-201ENST00000524091 540 ntBASIC13.14□□□□□ -0.31
ALX3O95076 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.14□□□□□ -0.31
ALX3O95076 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.14□□□□□ -0.31
ALX3O95076 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.14□□□□□ -0.31
ALX3O95076 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
ALX3O95076 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 TIMM17BP1-201ENST00000545713 516 ntBASIC13.14□□□□□ -0.31
ALX3O95076 AC025678.2-201ENST00000562061 970 ntBASIC13.14□□□□□ -0.31
ALX3O95076 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.14□□□□□ -0.31
ALX3O95076 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.14□□□□□ -0.31
ALX3O95076 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.14□□□□□ -0.31
ALX3O95076 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.14□□□□□ -0.31
ALX3O95076 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.14□□□□□ -0.31
ALX3O95076 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.14□□□□□ -0.31
ALX3O95076 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.14□□□□□ -0.31
ALX3O95076 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.14□□□□□ -0.31
ALX3O95076 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ALX3O95076 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms