Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22BO75396 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22BO75396 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22BO75396 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SEC22BO75396 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.26□□□□□ -0.13
SEC22BO75396 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.26□□□□□ -0.13
SEC22BO75396 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.26□□□□□ -0.13
SEC22BO75396 AC016397.2-201ENST00000624848 1985 ntBASIC14.26□□□□□ -0.13
SEC22BO75396 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22BO75396 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22BO75396 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.26□□□□□ -0.13
SEC22BO75396 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22BO75396 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22BO75396 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.26□□□□□ -0.13
SEC22BO75396 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22BO75396 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.26□□□□□ -0.13
SEC22BO75396 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22BO75396 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SEC22BO75396 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22BO75396 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.26□□□□□ -0.13
SEC22BO75396 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22BO75396 API5-211ENST00000534695 560 ntTSL 5 BASIC14.26□□□□□ -0.13
SEC22BO75396 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
SEC22BO75396 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.26□□□□□ -0.13
SEC22BO75396 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.26□□□□□ -0.13
SEC22BO75396 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SEC22BO75396 LINC02560-201ENST00000596379 459 ntBASIC14.26□□□□□ -0.13
SEC22BO75396 AC008494.3-201ENST00000606615 944 ntBASIC14.26□□□□□ -0.13
SEC22BO75396 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.26□□□□□ -0.13
SEC22BO75396 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SEC22BO75396 INE2-201ENST00000630399 1874 ntBASIC14.26□□□□□ -0.13
SEC22BO75396 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22BO75396 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22BO75396 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.26□□□□□ -0.13
SEC22BO75396 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22BO75396 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.26□□□□□ -0.13
SEC22BO75396 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.26□□□□□ -0.13
SEC22BO75396 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22BO75396 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SEC22BO75396 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22BO75396 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22BO75396 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22BO75396 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SEC22BO75396 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SEC22BO75396 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SEC22BO75396 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.26□□□□□ -0.13
SEC22BO75396 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22BO75396 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SEC22BO75396 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22BO75396 AC011474.4-201ENST00000623523 2076 ntBASIC14.26□□□□□ -0.13
SEC22BO75396 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC22BO75396 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC22BO75396 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC22BO75396 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SEC22BO75396 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SEC22BO75396 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SEC22BO75396 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC22BO75396 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.25□□□□□ -0.13
SEC22BO75396 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SEC22BO75396 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC22BO75396 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 FAM207CP-201ENST00000443486 507 ntBASIC14.25□□□□□ -0.13
SEC22BO75396 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC22BO75396 AC022137.2-201ENST00000503482 481 ntBASIC14.25□□□□□ -0.13
SEC22BO75396 AC131206.1-201ENST00000538078 1211 ntBASIC14.25□□□□□ -0.13
SEC22BO75396 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.25□□□□□ -0.13
SEC22BO75396 AC009486.1-201ENST00000569860 813 ntBASIC14.25□□□□□ -0.13
SEC22BO75396 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.25□□□□□ -0.13
SEC22BO75396 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC22BO75396 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.25□□□□□ -0.13
SEC22BO75396 WFDC1-204ENST00000613603 549 ntBASIC14.25□□□□□ -0.13
SEC22BO75396 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC22BO75396 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC22BO75396 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.24□□□□□ -0.13
SEC22BO75396 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.24□□□□□ -0.13
SEC22BO75396 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms