Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM3O75382 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TRIM3O75382 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM3O75382 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.84□□□□□ -0.19
TRIM3O75382 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM3O75382 HLA-V-201ENST00000429037 534 ntBASIC13.84□□□□□ -0.19
TRIM3O75382 AC026954.1-201ENST00000429771 1293 ntBASIC13.84□□□□□ -0.19
TRIM3O75382 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM3O75382 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM3O75382 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM3O75382 BNIP3P42-201ENST00000454982 569 ntBASIC13.84□□□□□ -0.19
TRIM3O75382 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM3O75382 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.84□□□□□ -0.19
TRIM3O75382 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM3O75382 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM3O75382 AC078819.1-201ENST00000547454 765 ntBASIC13.84□□□□□ -0.19
TRIM3O75382 AC012085.1-201ENST00000548270 765 ntBASIC13.84□□□□□ -0.19
TRIM3O75382 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
TRIM3O75382 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.84□□□□□ -0.19
TRIM3O75382 BNIP3P29-201ENST00000598302 571 ntBASIC13.84□□□□□ -0.19
TRIM3O75382 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRIM3O75382 AC011447.5-201ENST00000616168 564 ntBASIC13.84□□□□□ -0.19
TRIM3O75382 ENPP7P14-201ENST00000621765 1040 ntBASIC13.84□□□□□ -0.19
TRIM3O75382 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM3O75382 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM3O75382 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM3O75382 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM3O75382 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM3O75382 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRIM3O75382 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM3O75382 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM3O75382 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM3O75382 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM3O75382 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM3O75382 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM3O75382 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRIM3O75382 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM3O75382 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.84□□□□□ -0.19
TRIM3O75382 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM3O75382 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM3O75382 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM3O75382 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM3O75382 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
TRIM3O75382 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRIM3O75382 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRIM3O75382 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
TRIM3O75382 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRIM3O75382 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRIM3O75382 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRIM3O75382 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.83□□□□□ -0.2
TRIM3O75382 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TRIM3O75382 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 CR383656.2-201ENST00000548656 2254 ntBASIC13.83□□□□□ -0.2
TRIM3O75382 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
TRIM3O75382 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
TRIM3O75382 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.83□□□□□ -0.2
TRIM3O75382 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.83□□□□□ -0.2
TRIM3O75382 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.83□□□□□ -0.2
TRIM3O75382 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRIM3O75382 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.83□□□□□ -0.2
TRIM3O75382 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.83□□□□□ -0.2
TRIM3O75382 AC138951.2-201ENST00000623455 1161 ntBASIC13.83□□□□□ -0.2
TRIM3O75382 AC008687.7-202ENST00000637404 953 ntBASIC13.83□□□□□ -0.2
TRIM3O75382 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRIM3O75382 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.83□□□□□ -0.2
TRIM3O75382 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 AC107918.4-201ENST00000641966 3141 ntBASIC13.83□□□□□ -0.2
TRIM3O75382 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.83□□□□□ -0.2
TRIM3O75382 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.83□□□□□ -0.2
TRIM3O75382 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
TRIM3O75382 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM3O75382 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRIM3O75382 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TRIM3O75382 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM3O75382 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM3O75382 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRIM3O75382 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms