Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.48■□□□□ 0.07
OPHN1O60890 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
OPHN1O60890 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.48■□□□□ 0.07
OPHN1O60890 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.48■□□□□ 0.07
OPHN1O60890 AP001258.2-201ENST00000529891 490 ntBASIC15.48■□□□□ 0.07
OPHN1O60890 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 KRT90P-201ENST00000549264 1064 ntBASIC15.48■□□□□ 0.07
OPHN1O60890 AC023310.1-201ENST00000554836 735 ntBASIC15.48■□□□□ 0.07
OPHN1O60890 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.48■□□□□ 0.07
OPHN1O60890 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 AC244669.2-201ENST00000612320 853 ntBASIC15.48■□□□□ 0.07
OPHN1O60890 AC008687.7-202ENST00000637404 953 ntBASIC15.48■□□□□ 0.07
OPHN1O60890 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 KRT8P14-201ENST00000414254 1442 ntBASIC15.48■□□□□ 0.07
OPHN1O60890 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
OPHN1O60890 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.48■□□□□ 0.07
OPHN1O60890 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.48■□□□□ 0.07
OPHN1O60890 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.48■□□□□ 0.07
OPHN1O60890 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.48■□□□□ 0.07
OPHN1O60890 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPHN1O60890 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
OPHN1O60890 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.47■□□□□ 0.07
OPHN1O60890 AC023090.2-201ENST00000625182 2110 ntBASIC15.47■□□□□ 0.07
OPHN1O60890 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
OPHN1O60890 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
OPHN1O60890 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
OPHN1O60890 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 AC113367.3-201ENST00000508316 1912 ntBASIC15.47■□□□□ 0.07
OPHN1O60890 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.47■□□□□ 0.07
OPHN1O60890 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
OPHN1O60890 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 SLC25A24P2-201ENST00000415059 510 ntBASIC15.47■□□□□ 0.07
OPHN1O60890 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.47■□□□□ 0.07
OPHN1O60890 AC093433.1-201ENST00000458048 571 ntBASIC15.47■□□□□ 0.07
OPHN1O60890 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.47■□□□□ 0.07
OPHN1O60890 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
OPHN1O60890 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.47■□□□□ 0.07
OPHN1O60890 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.47■□□□□ 0.07
OPHN1O60890 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
OPHN1O60890 C2orf69P2-201ENST00000562032 1123 ntBASIC15.47■□□□□ 0.07
OPHN1O60890 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.47■□□□□ 0.07
OPHN1O60890 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.47■□□□□ 0.07
OPHN1O60890 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.47■□□□□ 0.07
OPHN1O60890 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.47■□□□□ 0.07
OPHN1O60890 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.47■□□□□ 0.07
OPHN1O60890 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
OPHN1O60890 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.47■□□□□ 0.07
OPHN1O60890 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPHN1O60890 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
OPHN1O60890 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
OPHN1O60890 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
OPHN1O60890 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.46■□□□□ 0.07
OPHN1O60890 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
OPHN1O60890 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
OPHN1O60890 AC107918.4-201ENST00000641966 3141 ntBASIC15.46■□□□□ 0.07
OPHN1O60890 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
OPHN1O60890 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
OPHN1O60890 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
OPHN1O60890 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
OPHN1O60890 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
OPHN1O60890 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
OPHN1O60890 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
OPHN1O60890 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
OPHN1O60890 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.46■□□□□ 0.07
OPHN1O60890 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
OPHN1O60890 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
OPHN1O60890 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
OPHN1O60890 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
OPHN1O60890 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
OPHN1O60890 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms