Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 MIR6080-201ENST00000617359 66 ntBASIC12.08□□□□□ -0.48
SSSCA1O60232 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.08□□□□□ -0.48
SSSCA1O60232 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.08□□□□□ -0.48
SSSCA1O60232 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.08□□□□□ -0.48
SSSCA1O60232 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.08□□□□□ -0.48
SSSCA1O60232 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 AC004241.5-201ENST00000623870 2448 ntBASIC12.08□□□□□ -0.48
SSSCA1O60232 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.08□□□□□ -0.48
SSSCA1O60232 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SSSCA1O60232 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSSCA1O60232 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
SSSCA1O60232 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.07□□□□□ -0.48
SSSCA1O60232 HSPA8P5-201ENST00000456928 2069 ntBASIC12.07□□□□□ -0.48
SSSCA1O60232 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.07□□□□□ -0.48
SSSCA1O60232 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.07□□□□□ -0.48
SSSCA1O60232 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 AC114271.1-201ENST00000612689 2813 ntBASIC12.07□□□□□ -0.48
SSSCA1O60232 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.07□□□□□ -0.48
SSSCA1O60232 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
SSSCA1O60232 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.07□□□□□ -0.48
SSSCA1O60232 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.07□□□□□ -0.48
SSSCA1O60232 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.07□□□□□ -0.48
SSSCA1O60232 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.07□□□□□ -0.48
SSSCA1O60232 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.07□□□□□ -0.48
SSSCA1O60232 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
SSSCA1O60232 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.07□□□□□ -0.48
SSSCA1O60232 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.07□□□□□ -0.48
SSSCA1O60232 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.07□□□□□ -0.48
SSSCA1O60232 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.07□□□□□ -0.48
SSSCA1O60232 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
SSSCA1O60232 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.07□□□□□ -0.48
SSSCA1O60232 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SSSCA1O60232 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 MIR4453-201ENST00000584019 89 ntBASIC12.07□□□□□ -0.48
SSSCA1O60232 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.07□□□□□ -0.48
SSSCA1O60232 AC022145.2-201ENST00000598203 171 ntBASIC12.07□□□□□ -0.48
SSSCA1O60232 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.07□□□□□ -0.48
SSSCA1O60232 AC090643.2-201ENST00000623442 2029 ntBASIC12.07□□□□□ -0.48
SSSCA1O60232 C20orf181-201ENST00000623918 480 ntBASIC12.07□□□□□ -0.48
SSSCA1O60232 AC011498.7-201ENST00000624986 2027 ntBASIC12.07□□□□□ -0.48
SSSCA1O60232 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
SSSCA1O60232 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.07□□□□□ -0.48
SSSCA1O60232 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
SSSCA1O60232 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 AC083964.2-201ENST00000623988 2396 ntBASIC12.07□□□□□ -0.48
SSSCA1O60232 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.07□□□□□ -0.48
SSSCA1O60232 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.07□□□□□ -0.48
SSSCA1O60232 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.07□□□□□ -0.48
SSSCA1O60232 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.07□□□□□ -0.48
SSSCA1O60232 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
SSSCA1O60232 AL158070.2-201ENST00000623713 1621 ntBASIC12.07□□□□□ -0.48
SSSCA1O60232 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.07□□□□□ -0.48
SSSCA1O60232 AC068760.1-201ENST00000493579 1953 ntBASIC12.07□□□□□ -0.48
SSSCA1O60232 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
SSSCA1O60232 AC215219.1-201ENST00000400706 1817 ntBASIC12.07□□□□□ -0.48
SSSCA1O60232 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSSCA1O60232 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.06□□□□□ -0.48
SSSCA1O60232 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.06□□□□□ -0.48
SSSCA1O60232 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.06□□□□□ -0.48
SSSCA1O60232 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.06□□□□□ -0.48
SSSCA1O60232 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
SSSCA1O60232 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms