Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 CR2-203ENST00000367059 3877 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SHMT2-201ENST00000328923 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AP000867.3-201ENST00000524675 377 ntBASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC074051.2-201ENST00000565115 352 ntBASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC022364.1-202ENST00000617468 2409 ntBASIC12.86□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ARHGEF10-203ENST00000398560 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ATG13-211ENST00000528494 2351 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SLC44A4-210ENST00000544672 2634 ntTSL 2 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 TUFT1-202ENST00000368848 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 BNIP3P18-201ENST00000593976 575 ntBASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC114341.1-201ENST00000618070 349 ntBASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 NTNG1-207ENST00000370073 3347 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 MAX-212ENST00000555932 1673 ntTSL 5 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 FLJ30679-201ENST00000624773 1980 ntBASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 AC004623.1-201ENST00000624592 2127 ntBASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 OSBPL7-202ENST00000392507 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 RPS24-204ENST00000440692 2814 ntTSL 3 BASIC12.84□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC12.84□□□□□ -0.35
BOLA2-SMG1P6H3BVE0 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms