Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 AC068587.3-201ENST00000526613 355 ntBASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX49Q9Y6V7 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 SOCS2P1-201ENST00000417727 557 ntBASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 AC093433.1-201ENST00000458048 571 ntBASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 FTH1P14-201ENST00000482930 551 ntBASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 AL583810.1-201ENST00000553344 1045 ntBASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 GPR182-203ENST00000622922 591 ntBASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX49Q9Y6V7 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX49Q9Y6V7 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms