Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHB13Q9Y5F0 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB13Q9Y5F0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB13Q9Y5F0 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB13Q9Y5F0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 AL513477.1-201ENST00000602865 2407 ntBASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 AC007292.2-201ENST00000593524 1812 ntBASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 AL365209.1-201ENST00000624418 6473 ntBASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 KRTAP4-1-201ENST00000398472 1241 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 PTMA-204ENST00000409683 933 ntAPPRIS ALT1 TSL 3 BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 LARP7P4-201ENST00000481075 878 ntBASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 ZNF92P3-201ENST00000596594 954 ntBASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 AC244669.2-201ENST00000612320 853 ntBASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 SYT14P1-202ENST00000600441 1448 ntBASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB13Q9Y5F0 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 FKBP4P6-201ENST00000457486 1332 ntBASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 BOLA2P3-201ENST00000404566 256 ntBASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 HSFY7P-201ENST00000432672 318 ntBASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 FAM197Y7-201ENST00000432892 766 ntBASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 HSFY8P-201ENST00000437934 318 ntBASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 ATP6AP2-204ENST00000447485 1254 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 HSFY5P-201ENST00000453726 309 ntBASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 KRT17P8-201ENST00000540749 863 ntBASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 AC012309.1-203ENST00000585860 965 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms