Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHANK2Q9UPX8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC21.29■■□□□ 1
SHANK2Q9UPX8 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SHANK2Q9UPX8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHANK2Q9UPX8 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC21.29■■□□□ 1
SHANK2Q9UPX8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC21.29■■□□□ 1
SHANK2Q9UPX8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SHANK2Q9UPX8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
SHANK2Q9UPX8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SHANK2Q9UPX8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHANK2Q9UPX8 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC21.28■■□□□ 1
SHANK2Q9UPX8 SARS-202ENST00000369923 1882 ntTSL 5 BASIC21.28■■□□□ 1
SHANK2Q9UPX8 USP35-204ENST00000530267 2419 ntTSL 2 BASIC21.28■■□□□ 1
SHANK2Q9UPX8 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
SHANK2Q9UPX8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SHANK2Q9UPX8 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC21.28■■□□□ 1
SHANK2Q9UPX8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC21.28■■□□□ 1
SHANK2Q9UPX8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHANK2Q9UPX8 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHANK2Q9UPX8 AC108734.2-201ENST00000420887 1069 ntBASIC21.28■■□□□ 1
SHANK2Q9UPX8 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC21.28■■□□□ 1
SHANK2Q9UPX8 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC21.28■■□□□ 1
SHANK2Q9UPX8 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC21.28■■□□□ 1
SHANK2Q9UPX8 GNG10P1-201ENST00000452289 199 ntBASIC21.28■■□□□ 1
SHANK2Q9UPX8 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC21.28■■□□□ 1
SHANK2Q9UPX8 KRT18P15-201ENST00000458108 1291 ntBASIC21.28■■□□□ 1
SHANK2Q9UPX8 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC21.28■■□□□ 1
SHANK2Q9UPX8 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SHANK2Q9UPX8 MT2A-202ENST00000561491 581 ntTSL 2 BASIC21.28■■□□□ 1
SHANK2Q9UPX8 AL118522.1-201ENST00000611368 560 ntBASIC21.28■■□□□ 1
SHANK2Q9UPX8 AC091769.1-201ENST00000619576 568 ntBASIC21.28■■□□□ 1
SHANK2Q9UPX8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.28■■□□□ 1
SHANK2Q9UPX8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHANK2Q9UPX8 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC21.28■■□□□ 1
SHANK2Q9UPX8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC21.28■■□□□ 1
SHANK2Q9UPX8 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHANK2Q9UPX8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SHANK2Q9UPX8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SHANK2Q9UPX8 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SHANK2Q9UPX8 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SHANK2Q9UPX8 AL357373.1-201ENST00000394974 322 ntBASIC21.27■■□□□ 1
SHANK2Q9UPX8 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC21.27■■□□□ 1
SHANK2Q9UPX8 AREG-202ENST00000502307 956 ntTSL 5 BASIC21.27■■□□□ 1
SHANK2Q9UPX8 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC21.27■■□□□ 1
SHANK2Q9UPX8 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC21.27■■□□□ 1
SHANK2Q9UPX8 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC21.27■■□□□ 1
SHANK2Q9UPX8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SHANK2Q9UPX8 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC21.27■■□□□ 1
SHANK2Q9UPX8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SHANK2Q9UPX8 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SHANK2Q9UPX8 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC21.27■■□□□ 1
SHANK2Q9UPX8 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC21.27■■□□□ 1
SHANK2Q9UPX8 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SHANK2Q9UPX8 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SHANK2Q9UPX8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SHANK2Q9UPX8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
SHANK2Q9UPX8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
SHANK2Q9UPX8 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
SHANK2Q9UPX8 RPL13AP3-202ENST00000494676 1473 ntBASIC21.27■□□□□ 0.99
SHANK2Q9UPX8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 GRPEL2P1-201ENST00000453145 339 ntBASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 AC084752.1-201ENST00000509766 622 ntBASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 AC226150.1-201ENST00000544259 466 ntBASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 COX5A-205ENST00000568517 582 ntTSL 3 BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 MIR4265-201ENST00000582152 99 ntBASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 MIR4472-1-201ENST00000584349 80 ntBASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 FTLP5-201ENST00000586853 534 ntBASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 TUBB8P4-201ENST00000511806 1324 ntBASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 COX20P1-201ENST00000366529 357 ntBASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 GCSHP3-201ENST00000431120 391 ntBASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 AC093909.3-201ENST00000504783 336 ntBASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 GOLGA2P8-201ENST00000505201 779 ntBASIC21.26■□□□□ 0.99
SHANK2Q9UPX8 RNA5SP406-201ENST00000516106 112 ntBASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms