Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.88□□□□□ -0.19
CTSFQ9UBX1 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 AC012441.2-201ENST00000444843 739 ntBASIC13.88□□□□□ -0.19
CTSFQ9UBX1 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 AL645939.5-201ENST00000606834 243 ntBASIC13.88□□□□□ -0.19
CTSFQ9UBX1 AC090164.2-201ENST00000611487 516 ntBASIC13.88□□□□□ -0.19
CTSFQ9UBX1 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.88□□□□□ -0.19
CTSFQ9UBX1 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 CYP46A4P-201ENST00000414953 267 ntBASIC13.87□□□□□ -0.19
CTSFQ9UBX1 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 VDAC1P1-201ENST00000439229 848 ntBASIC13.87□□□□□ -0.19
CTSFQ9UBX1 SPTLC1P5-201ENST00000450718 252 ntBASIC13.87□□□□□ -0.19
CTSFQ9UBX1 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 AL606495.2-201ENST00000605867 535 ntBASIC13.87□□□□□ -0.19
CTSFQ9UBX1 AC026740.1-201ENST00000607068 791 ntBASIC13.87□□□□□ -0.19
CTSFQ9UBX1 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CTSFQ9UBX1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSFQ9UBX1 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CTSFQ9UBX1 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CTSFQ9UBX1 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSFQ9UBX1 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CTSFQ9UBX1 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSFQ9UBX1 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.86□□□□□ -0.19
CTSFQ9UBX1 AC136759.1-202ENST00000530858 2194 ntBASIC13.86□□□□□ -0.19
CTSFQ9UBX1 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CTSFQ9UBX1 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CTSFQ9UBX1 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSFQ9UBX1 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
CTSFQ9UBX1 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSFQ9UBX1 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.86□□□□□ -0.19
CTSFQ9UBX1 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CTSFQ9UBX1 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms