Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 AC010336.1-201ENST00000539278 4739 ntBASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 AL121723.1-201ENST00000445194 1519 ntBASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 MKNK2P1-201ENST00000437526 628 ntBASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 SERBP1P3-201ENST00000459980 809 ntBASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 SLC25A1P1-201ENST00000528351 927 ntBASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 AC040169.1-201ENST00000565382 521 ntBASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 SAMD11P1-201ENST00000571429 661 ntBASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 AC090114.2-201ENST00000608477 7054 ntBASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SND1-IT1Q9HBX3 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SND1-IT1Q9HBX3 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms