Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 AC003102.2-201ENST00000589195 1469 ntBASIC12.97□□□□□ -0.33
CDH20Q9HBT6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 AL138725.1-201ENST00000407347 1314 ntBASIC12.96□□□□□ -0.33
CDH20Q9HBT6 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 AC022210.1-201ENST00000449856 793 ntBASIC12.96□□□□□ -0.33
CDH20Q9HBT6 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 AL391280.1-201ENST00000506969 1062 ntBASIC12.96□□□□□ -0.33
CDH20Q9HBT6 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 SNX29P1-201ENST00000548357 1007 ntBASIC12.96□□□□□ -0.33
CDH20Q9HBT6 AC106820.3-201ENST00000561653 397 ntBASIC12.96□□□□□ -0.33
CDH20Q9HBT6 AC138696.2-201ENST00000607376 223 ntBASIC12.96□□□□□ -0.33
CDH20Q9HBT6 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.96□□□□□ -0.33
CDH20Q9HBT6 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
CDH20Q9HBT6 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.96□□□□□ -0.34
CDH20Q9HBT6 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
CDH20Q9HBT6 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
CDH20Q9HBT6 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.96□□□□□ -0.34
CDH20Q9HBT6 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CDH20Q9HBT6 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
CDH20Q9HBT6 AC106881.1-201ENST00000605849 3329 ntBASIC12.96□□□□□ -0.34
CDH20Q9HBT6 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CDH20Q9HBT6 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CDH20Q9HBT6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CDH20Q9HBT6 AC007686.3-201ENST00000619017 3487 ntBASIC12.96□□□□□ -0.34
CDH20Q9HBT6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 AC139749.1-202ENST00000617529 3139 ntBASIC12.95□□□□□ -0.34
CDH20Q9HBT6 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 CICP23-201ENST00000605013 2741 ntBASIC12.95□□□□□ -0.34
CDH20Q9HBT6 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 AC011840.2-201ENST00000563063 1520 ntBASIC12.95□□□□□ -0.34
CDH20Q9HBT6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 YBX1P6-201ENST00000442962 1002 ntBASIC12.95□□□□□ -0.34
CDH20Q9HBT6 HOMER2P2-201ENST00000451621 847 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms